RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
PTPN2-201ENST00000309660 C1QTNF1Q9BXJ1 281 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 DRC3Q9H069 523 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 RNF186Q9NXI6 227 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 CDYLQ9Y232 598 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 ACTL7AQ9Y615 435 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 TSC2P49815 1807 aa11.66□□□□□ -0.54
PTPN2-201ENST00000309660 TMEM114B3SHH9 223 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 TYMPP19971 482 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 YWHAQP27348 245 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 PIK3R1P27986 724 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 ACVRL1P37023 503 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 ACLYP53396 1101 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 GALNT3Q14435 633 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 POLD3Q15054 466 aaPredicted RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 LPCAT4Q643R3 524 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 RANBP10Q6VN20 620 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 PCSK9Q8NBP7 692 aaKnown RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 TMA16Q96EY4 203 aaKnown RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 YIPF3Q9GZM5 350 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 MRPL46Q9H2W6 279 aaKnown RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 ZNF212Q9UDV6 495 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 ANKRD6Q9Y2G4 727 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 TLL2Q9Y6L7 1015 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 MATN2O00339 956 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 RAMP2O60895 175 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 CAPN15O75808 1086 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 PRKAA1Q13131 559 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 BLMHQ13867 455 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 MANEALQ5VSG8 457 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 TRIM67Q6ZTA4 783 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 PIM3Q86V86 326 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 TXNDC5Q8NBS9 432 aaKnown RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 STYXQ8WUJ0 223 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 RCN3Q96D15 328 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 IFT43Q96FT9 208 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
PTPN2-201ENST00000309660 OLFM1Q99784 485 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 SEMA3CQ99985 751 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 GPR62Q9BZJ7 368 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 FBXO44Q9H4M3 255 aa11.65□□□□□ -0.54
PTPN2-201ENST00000309660 HEATR9A2RTY3 570 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 F8W8V4 182 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 TXNDC9O14530 226 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 TRPA1O75762 1119 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 ATP5BP06576 529 aaKnown RBP11.65□□□□□ -0.55
PTPN2-201ENST00000309660 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 MYL4P12829 197 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 ACADSP16219 412 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 HADHAP40939 763 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 PSEN1P49768 467 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 ARSDP51689 593 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 DUSP4Q13115 394 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 MBTPS1Q14703 1052 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 C1orf21Q9H246 121 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 CCSER2Q9H7U1 834 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 NCKIPSDQ9NZQ3 722 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 POMPQ9Y244 141 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 TLR6Q9Y2C9 796 aa11.65□□□□□ -0.55
PTPN2-201ENST00000309660 ATP6AP2A0A1C7CYW4 349 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ATP6AP2O75787 350 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 KCNA5P22460 613 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ZNF235Q14590 738 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 FAM83EQ2M2I3 478 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ISLR2Q6UXK2 745 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 OR52K2Q8NGK3 314 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 CDRT15Q96T59 188 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 SLC25A51Q9H1U9 297 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ALG9Q9H6U8 611 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.64□□□□□ -0.55
PTPN2-201ENST00000309660 LRCH1Q9Y2L9 728 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 STX16-NPEPL1H3BU86 382 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 DNAJB2P25686 324 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ADRA1AP35348 466 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 KCNQ1P51787 676 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ART3Q13508 389 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 HNRNPDQ14103 355 aaKnown RBP11.64□□□□□ -0.55
PTPN2-201ENST00000309660 TRIP10Q15642 601 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 GRAMD1BQ3KR37 738 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 FBXO48Q5FWF7 155 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 TMEM151AQ8N4L1 468 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 TBATAQ96M53 351 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 UPF3AQ9H1J1 476 aaKnown RBP11.64□□□□□ -0.55
PTPN2-201ENST00000309660 LAMA3Q16787 3333 aa11.64□□□□□ -0.55
PTPN2-201ENST00000309660 UBA6A0AVT1 1052 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 DPPA5A6NC42 116 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 GRID2O43424 1007 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SLC2A3P11169 496 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 CRABP2P29373 138 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 CYLC2Q14093 348 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 GPR158Q5T848 1215 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 MYLK4Q86YV6 388 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 OR6Y1Q8NGX8 325 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 MYEOVQ96EZ4 313 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 ZCWPW1Q9H0M4 648 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SLC24A3Q9HC58 644 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms