RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 WDR55Q9H6Y2 383 aaPredicted RBP9.98□□□□□ -0.81
TMOD3-201ENST00000308580 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 LINC00854A0A1B0GVQ3 168 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 SNTNA6NMZ2 147 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 NTRK1P04629 796 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 SFSWAPQ12872 951 aaKnown RBP9.98□□□□□ -0.81
TMOD3-201ENST00000308580 RP9Q8TA86 221 aaKnown RBP9.98□□□□□ -0.81
TMOD3-201ENST00000308580 RDH11Q8TC12 318 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 ELMO1Q92556 727 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 STXBP5LQ9Y2K9 1186 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 PTGES3LE9PB15 166 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 SMPD1P17405 629 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 PTPN9P43378 593 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 POM121L1PQ3SYA9 428 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 FNDC3BQ53EP0 1204 aaKnown RBP9.98□□□□□ -0.81
TMOD3-201ENST00000308580 SDCBP2Q9H190 292 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 ZFP14Q9HCL3 533 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 PDE4DIPQ5VU43 2346 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 KRT87PA6NCN2 255 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 OR6C75A6NL08 312 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 C2CD4BA6NLJ0 364 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 ULK1O75385 1050 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 VNN1O95497 513 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 ELNP15502 786 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 ITGA7Q13683 1181 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 PLEKHM3Q6ZWE6 761 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 BNIPLQ7Z465 357 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 CLVS1Q8IUQ0 354 aaPredicted RBP9.98□□□□□ -0.81
TMOD3-201ENST00000308580 FBXW8Q8N3Y1 598 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 OR4L1Q8NH43 312 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 ACTRT2Q8TDY3 377 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 TMEM109Q9BVC6 243 aa9.98□□□□□ -0.81
TMOD3-201ENST00000308580 SNED1Q8TER0 1413 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 COX7A2P14406 83 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 PTPN3P26045 913 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MAPK8P45983 427 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 LILRA4P59901 499 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ANKRD23Q86SG2 305 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 RIBC2Q9H4K1 309 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ATP13A3Q9H7F0 1226 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 DDX18Q9NVP1 670 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CD3EAPO15446 510 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ZNF280AP59817 542 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CLNKQ7Z7G1 428 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ULK2Q8IYT8 1036 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 KRT78Q8N1N4 520 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ZNF513Q8N8E2 541 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 SHISA4Q96DD7 197 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 TRAPPC9Q96Q05 1148 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 C1orf50Q9BV19 199 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 FZD8Q9H461 694 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ACSS2Q9NR19 701 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 THG1LQ9NWX6 298 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 AZIN1O14977 448 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CENPAP49450 140 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MARK2Q7KZI7 788 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 HJURPQ8NCD3 748 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 PIK3R5Q8WYR1 880 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 C12orf42Q96LP6 360 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 GNPTGQ9UJJ9 305 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CHKBQ9Y259 395 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ATRNL1Q5VV63 1379 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 C2orf71A6NGG8 1288 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MLYCDO95822 493 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CREB1P16220 341 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 PIK3R1P27986 724 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CLCNKBP51801 687 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 TGM3Q08188 693 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 PPM1JQ5JR12 505 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 DSG4Q86SJ6 1040 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 DHDDSQ86SQ9 333 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 AMIGO3Q86WK7 504 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 OR6K2Q8NGY2 324 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 SPPL2BQ8TCT7 592 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 SUSD6Q92537 303 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MFSD3Q96ES6 412 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MAML3Q96JK9 1138 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 QKIQ96PU8 341 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 NFKBIZQ9BYH8 718 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CDH19Q9H159 772 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 STN1Q9H668 368 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 DHX15O43143 795 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 LRIG2O94898 1065 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 JAG1P78504 1218 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 DLK2Q6UY11 383 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 CCDC149Q6ZUS6 474 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ZNF516Q92618 1163 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 AGO3Q9H9G7 860 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ADPRHL2Q9NX46 363 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MTF2Q9Y483 593 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 RPTORQ8N122 1335 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 TRAV19A0A0A6YYK7 116 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 TBC1D3BA6NDS4 549 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 FAM20BO75063 409 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 MRPL28Q13084 256 aaKnown RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 PREPLQ4J6C6 727 aaPredicted RBP9.97□□□□□ -0.81
TMOD3-201ENST00000308580 ADGRD1Q6QNK2 874 aa9.97□□□□□ -0.81
TMOD3-201ENST00000308580 GPRIN3Q6ZVF9 776 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms