RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PEX11BO96011 259 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 RARAP10276 462 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 DESP17661 470 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 AKT2P31751 481 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 ARRB1P49407 418 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 ZNF135P52742 658 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 SMTNL2Q2TAL5 461 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 KYAT3Q6YP21 454 aaKnown RBP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 CCNI2Q6ZMN8 369 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 TMPRSS7Q7RTY8 843 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 POLNQ7Z5Q5 900 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 ZSWIM9Q86XI8 627 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 ZNF354CQ86Y25 554 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 FAM71BQ8TC56 605 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 FEM1CQ96JP0 617 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 LENG8Q96PV6 779 aaPredicted RBP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 DNAJC7Q99615 494 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 KLHL11Q9NVR0 708 aa20.07■□□□□ 0.8
PDZRN3-202ENST00000308537 SHROOM3Q8TF72 1996 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 ZFYVE26Q68DK2 2539 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 KRT37O76014 449 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 ITGAVP06756 1048 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 IL4RP24394 825 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 PIGHQ14442 188 aaPredicted RBP20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 ZSCAN30Q86W11 494 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 TSEN2Q8NCE0 465 aaKnown RBP20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 CENPTQ96BT3 561 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 NCAPGQ9BPX3 1015 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 NUP85Q9BW27 656 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 DONSONQ9NYP3 566 aa20.06■□□□□ 0.8
PDZRN3-202ENST00000308537 ASXL3Q9C0F0 2248 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 ARHGAP42A6NI28 874 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 SDC3O75056 442 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 AMPD1P23109 780 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 CSNK1DP48730 415 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 ARSEP51690 589 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 DNAJC3Q13217 504 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 FZD2Q14332 565 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 BOLA3Q53S33 107 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 MARCH9Q86YJ5 346 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 EID2Q8N6I1 236 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 TEKT4Q8WW24 435 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 CSPG4P5Q96PW8 444 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 PACSIN1Q9BY11 444 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 PCDH18Q9HCL0 1135 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 UCKL1Q9NWZ5 548 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 FTSJ1Q9UET6 329 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 ANAPC7Q9UJX3 599 aa20.05■□□□□ 0.8
PDZRN3-202ENST00000308537 A6NNZ2 444 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 TRIM38O00635 465 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 EIF4A3P38919 411 aaKnown RBP20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 ACADVLP49748 655 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 PFN3P60673 137 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 IL10RBQ08334 325 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 SMAD1Q15797 465 aaKnown RBP20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 PROX2Q3B8N5 592 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 INAVAQ3KP66 663 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 CCDC122Q5T0U0 273 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 Q6ZSR6 202 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 VPS36Q86VN1 386 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 VSTM4Q8IW00 320 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 DENND6BQ8NEG7 585 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 HCAR2Q8TDS4 363 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 ECHDC3Q96DC8 303 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 SUV39H2Q9H5I1 410 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 ZWILCHQ9H900 591 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 IPO11Q9UI26 975 aaKnown RBP20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 KLF15Q9UIH9 416 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 PNMA8BQ9ULN7 279 aaPredicted RBP20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 LRP4O75096 1905 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 MYLKQ15746 1914 aa20.04■□□□□ 0.8
PDZRN3-202ENST00000308537 SPTY2D1-AS1A0A0U1RR47 76 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 ENC1O14682 589 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 PIAS2O75928 621 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 DGKAP23743 735 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 IGFALSP35858 605 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 CAMK2BQ13554 666 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 TMEM52BQ4KMG9 183 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 SPECC1LQ69YQ0 1117 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 TTC7BQ86TV6 843 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 CAMK1DQ8IU85 385 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 TP53I13Q8NBR0 393 aaPredicted RBP20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 FAM174AQ8TBP5 190 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 HSPH1Q92598 858 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 IFT43Q96FT9 208 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 CNDP2Q96KP4 475 aaKnown RBP20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 CALN1Q9BXU9 219 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 IP6K2Q9UHH9 426 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 ZMIZ1Q9ULJ6 1067 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 PCDHGA1Q9Y5H4 931 aa20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 DSPP15924 2871 aaKnown RBP20.03■□□□□ 0.8
PDZRN3-202ENST00000308537 GOLGA8CPA6NN73 597 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 H3BRJ5 948 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 TAF4O00268 1085 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 DFFAO00273 331 aa20.02■□□□□ 0.8
PDZRN3-202ENST00000308537 TRAFD1O14545 582 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms