RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 SPPL2BQ8TCT7 592 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.74■□□□□ 0.27
SSH3-201ENST00000308127 FBXW11Q9UKB1 542 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 CEPT1Q9Y6K0 416 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 OR51F1A6NGY5 319 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 AKAP10O43572 662 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 GPC4O75487 556 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 SLC4A1P02730 911 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 RPL34P49207 117 aaKnown RBP16.74■□□□□ 0.27
SSH3-201ENST00000308127 PLOD1Q02809 727 aaPredicted RBP16.74■□□□□ 0.27
SSH3-201ENST00000308127 PIM3Q86V86 326 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 CPSF7Q8N684 471 aaKnown RBP16.74■□□□□ 0.27
SSH3-201ENST00000308127 OR6J1Q8NGC5 347 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 ANKRD49Q8WVL7 239 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 LPPQ93052 612 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 SLC2A13Q96QE2 648 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 TBL1YQ9BQ87 522 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 ZNF696Q9H7X3 374 aa16.74■□□□□ 0.27
SSH3-201ENST00000308127 TDRKHQ9Y2W6 561 aaKnown RBP16.74■□□□□ 0.27
SSH3-201ENST00000308127 SBF1O95248 1867 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 SOCS2O14508 198 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 TMCC1O94876 653 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 CDH2P19022 906 aaPredicted RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 NPY2RP49146 381 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 SEMA3BQ13214 749 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 APOFQ13790 326 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 TRIM25Q14258 630 aaKnown RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 CAPRIN1Q14444 709 aaKnown RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 MYBPC3Q14896 1274 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 ITPRIPL1Q6GPH6 555 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 PDZD4Q76G19 769 aaPredicted RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 TAC4Q86UU9 113 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 FAM47BQ8NA70 645 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 CANT1Q8WVQ1 401 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 MRPL46Q9H2W6 279 aaKnown RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 SOX17Q9H6I2 414 aaPredicted RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 DMTF1Q9Y222 760 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 NRCAMQ92823 1304 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 ASB14A6NK59 587 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 UBDO15205 165 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 TRMUO75648 421 aaKnown RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 CCDC166P0CW27 439 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 CES1P23141 567 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 KCNC1P48547 511 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 PGFP49763 221 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 PKN3Q6P5Z2 889 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 CHERPQ8IWX8 916 aaKnown RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 C3orf30Q96M34 536 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 ZNF560Q96MR9 790 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 NCKIPSDQ9NZQ3 722 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 MPP6Q9NZW5 540 aa16.73■□□□□ 0.27
SSH3-201ENST00000308127 CNOT6Q9ULM6 557 aaKnown RBP16.73■□□□□ 0.27
SSH3-201ENST00000308127 MRASO14807 208 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 CACNB2Q08289 660 aaPredicted RBP16.72■□□□□ 0.27
SSH3-201ENST00000308127 GALNT2Q10471 571 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
SSH3-201ENST00000308127 CUZD1Q86UP6 607 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 IFNEQ86WN2 208 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 NLGN2Q8NFZ4 835 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 SCAMP5Q8TAC9 235 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 RIN3Q8TB24 985 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 PIF1Q9H611 641 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 ALG9Q9H6U8 611 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 IPPQ9Y573 584 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 TRIP12Q14669 1992 aaPredicted RBP16.72■□□□□ 0.27
SSH3-201ENST00000308127 LOC285556D6RIA3 1793 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 LTBP3Q9NS15 1303 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 ARHGAP10A1A4S6 786 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
SSH3-201ENST00000308127 MMP3P08254 477 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 PTPRCAPQ14761 206 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 GEN1Q17RS7 908 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 BTBD8Q5XKL5 378 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 LPCAT2Q7L5N7 544 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 FAM35AQ86V20 835 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 HDAC11Q96DB2 347 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 FSD1LQ9BXM9 530 aa16.72■□□□□ 0.27
SSH3-201ENST00000308127 A0A0J9YVX5 310 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 HEATR9A2RTY3 570 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 CASTOR2A6NHX0 329 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 A8MT66 165 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 UBFD1O14562 309 aaKnown RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 TREHO43280 583 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 H2AFYO75367 372 aaKnown RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 TADA2AO75478 443 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 SUPT7LO94864 414 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ATP6V1B2P21281 511 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 LRPAP1P30533 357 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 SV2CQ496J9 727 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 DENND5AQ6IQ26 1287 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 CHST15Q7LFX5 561 aaPredicted RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 ASB9Q96DX5 294 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 CDCA5Q96FF9 252 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 ZFRQ96KR1 1074 aaKnown RBP16.71■□□□□ 0.27
SSH3-201ENST00000308127 KIFC1Q9BW19 673 aa16.71■□□□□ 0.27
SSH3-201ENST00000308127 SLC2A11Q9BYW1 496 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms