RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ARHGEF26Q96DR7 871 aa11.99□□□□□ -0.49
SMIM4-201ENST00000307106 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
SMIM4-201ENST00000307106 RDH14Q9HBH5 336 aa11.99□□□□□ -0.49
SMIM4-201ENST00000307106 LRIT1Q9P2V4 623 aa11.99□□□□□ -0.49
SMIM4-201ENST00000307106 TP53TG5Q9Y2B4 290 aa11.99□□□□□ -0.49
SMIM4-201ENST00000307106 PCDHGA3Q9Y5H0 932 aa11.99□□□□□ -0.49
SMIM4-201ENST00000307106 CELSR2Q9HCU4 2923 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 LRBAP50851 2863 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 HGSO14964 777 aaPredicted RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 CETN3O15182 167 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 CAPN5O15484 640 aaPredicted RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 DUX1O43812 170 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 VPS4BO75351 444 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 CPNE6O95741 557 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 FGF3P11487 239 aaPredicted RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 GNLYP22749 145 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 HTR1BP28222 390 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 GKP32189 559 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 CDC20Q12834 499 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 NME3Q13232 169 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 SEPT6Q14141 434 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 IRF4Q15306 451 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 ARHGAP44Q17R89 818 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 C14orf28Q4W4Y0 310 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 ZNF805Q5CZA5 627 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 ZNF787Q6DD87 383 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 CAPRIN2Q6IMN6 1127 aaKnown RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 RETSATQ6NUM9 610 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 DENND1BQ6P3S1 775 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 PIM3Q86V86 326 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 SFTPA2Q8IWL1 248 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 PPM1KQ8N3J5 372 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 TEX19Q8NA77 164 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 STK32AQ8WU08 396 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 APOBEC4Q8WW27 367 aaKnown RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 KAT5Q92993 513 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 SLC45A3Q96JT2 553 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 NT5C1BQ96P26 610 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 SPON2Q9BUD6 331 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 TM6SF2Q9BZW4 377 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 VPS4AQ9UN37 437 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 FCF1Q9Y324 198 aaKnown RBP11.98□□□□□ -0.49
SMIM4-201ENST00000307106 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 B3GALT1Q9Y5Z6 326 aa11.98□□□□□ -0.49
SMIM4-201ENST00000307106 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 AREL1O15033 823 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 NUDT21O43809 227 aaKnown RBP11.97□□□□□ -0.49
SMIM4-201ENST00000307106 RAD1O60671 282 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 MMP20O60882 483 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 RNF224P0DH78 156 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 NR1D1P20393 614 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
SMIM4-201ENST00000307106 OR1E1P30953 314 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 SRP54P61011 504 aaKnown RBP11.97□□□□□ -0.49
SMIM4-201ENST00000307106 ARF5P84085 180 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 B4GALNT1Q00973 533 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 SLC20A2Q08357 652 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 HLTFQ14527 1009 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMIM4-201ENST00000307106 NFATC4Q14934 902 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 KLHL40Q2TBA0 621 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 DEFB109BQ30KR1 87 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 LRRC73Q5JTD7 316 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 OGFOD3Q6PK18 319 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 TFAP2DQ7Z6R9 452 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 TMEM110Q86TL2 294 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 FAM46DQ8NEK8 389 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 CXorf40AQ8TE69 158 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 PDXPQ96GD0 296 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 SLC2A13Q96QE2 648 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 RBM15Q96T37 977 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMIM4-201ENST00000307106 GPN2Q9H9Y4 310 aaPredicted RBP11.97□□□□□ -0.49
SMIM4-201ENST00000307106 KLQ9UEF7 1012 aa11.97□□□□□ -0.49
SMIM4-201ENST00000307106 EFCAB7A8K855 629 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 B4DGG1 531 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 GRAP2O75791 330 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 ZMPSTE24O75844 475 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 TNFP01375 233 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 UGT2B4P06133 528 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 NEFLP07196 543 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.49
SMIM4-201ENST00000307106 FOXD4L6Q3SYB3 417 aaPredicted RBP11.96□□□□□ -0.49
SMIM4-201ENST00000307106 AMZ1Q400G9 498 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 FOXD4L3Q6VB84 417 aaPredicted RBP11.96□□□□□ -0.49
SMIM4-201ENST00000307106 TAF8Q7Z7C8 310 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 TTC7BQ86TV6 843 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 HEATR4Q86WZ0 1026 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 CCDC112Q8NEF3 446 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 ATL2Q8NHH9 583 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 ART4Q93070 314 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 KIAA1143Q96AT1 154 aaPredicted RBP11.96□□□□□ -0.49
SMIM4-201ENST00000307106 CCDC74BQ96LY2 380 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 HAPLN3Q96S86 360 aa11.96□□□□□ -0.49
SMIM4-201ENST00000307106 NUDT22Q9BRQ3 303 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms