RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 GPALPP1Q8IXQ4 340 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 PHB2Q99623 299 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TPRP12270 2363 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 UGT2B17O75795 530 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SCGB1D2O95969 90 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 GNAO1P09471 354 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SAGP10523 405 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 DNAJB2P25686 324 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 OVOS1Q6IE37 1185 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SELENOMQ8WWX9 145 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 CPB2Q96IY4 423 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 RAB23Q9ULC3 237 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TBX20Q9UMR3 447 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 AZGP1P25311 298 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 MGAT1P26572 445 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SPANXN3Q5MJ09 141 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 KCTD4Q8WVF5 259 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 QRFPRQ96P65 431 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SPAG4Q9NPE6 437 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SDK1Q7Z5N4 2213 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 LRIG2O94898 1065 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 RAD9BQ6WBX8 426 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 UBE2J2Q8N2K1 259 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF75CPQ92670 426 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 ELAC1Q9H777 363 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 PRMT7Q9NVM4 692 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.254e-6■□□□□ 10.1
TRIM56-201ENST00000306085 IKZF2Q9UKS7 526 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 GNEQ9Y223 722 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 MAPKBP1O60336 1514 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 FLT1P17948 1338 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TSPAN5P62079 268 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 CDK16Q00536 496 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 CDYL2Q8N8U2 506 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SKA1Q96BD8 255 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 MAGEA6P43360 314 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 PIK3CGP48736 1102 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 SPDYCQ5MJ68 293 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF607Q96SK3 696 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TREM1Q9NP99 234 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TUBA4AP68366 448 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 MEMO1Q9Y316 297 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 NELFEP18615 380 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 TCEA1P23193 301 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 GADD45AP24522 165 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 CTXN3Q4LDR2 81 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 ZNHIT2Q9UHR6 403 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 AK5Q9Y6K8 562 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 CSF1RP07333 972 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 HNF4AP41235 474 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 DNASE1L3Q13609 305 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 PTPN20Q4JDL3 420 aa13.49□□□□□ -0.25
TRIM56-201ENST00000306085 NET1Q7Z628 596 aaPredicted RBP13.49□□□□□ -0.25
TRIM56-201ENST00000306085 A0A096LPK6 155 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 E7ENX8 843 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 NARSO43776 548 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 SLC20A2Q08357 652 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 PRAMEF17Q5VTA0 474 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF772Q68DY9 489 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ALG5Q9Y673 324 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 A0A087WZ62 844 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 AMD1P17707 334 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 PCDH1Q08174 1060 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 C11orf65Q8NCR3 313 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ATP6V1C2Q8NEY4 427 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 MGME1Q9BQP7 344 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 REXO2Q9Y3B8 237 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 FSBPO95073 299 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 PRKAA2P54646 552 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 MEA1Q16626 185 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 POM121L1PQ3SYA9 428 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 TOP1MTQ969P6 601 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 TARS2Q9BW92 718 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 PGAM2P15259 253 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 DRG2P55039 364 aaKnown RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 FAM76BQ5HYJ3 339 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 GPN3Q9UHW5 284 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 COMMD3-BMI1R4GMX3 469 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 SLC47A2Q86VL8 602 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 GRIN3AQ8TCU5 1115 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 CYP2A6P11509 494 aaPredicted RBP13.48□□□□□ -0.25
TRIM56-201ENST00000306085 FOLH1Q04609 750 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 TBC1D25Q3MII6 688 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 GNASQ5JWF2 1037 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 DAGLAQ9Y4D2 1042 aa13.48□□□□□ -0.25
TRIM56-201ENST00000306085 LOC100509620A0A075B734 347 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms