RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 HADHAP40939 763 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 GJA8P48165 433 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 AQP5P55064 265 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 DLG1Q12959 904 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 USP10Q14694 798 aaKnown RBP6.61□□□□□ -1.35
USP47-201ENST00000305481 PTPRCAPQ14761 206 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 CCDC153Q494R4 210 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 IL31Q6EBC2 164 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 CXorf57Q6NSI4 855 aaKnown RBP6.61□□□□□ -1.35
USP47-201ENST00000305481 CNSTQ6PJW8 725 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 MAVSQ7Z434 540 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 NSMCE1Q8WV22 266 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 MOCOSQ96EN8 888 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 ZNF599Q96NL3 588 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 GPR78Q96P69 363 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 TRIB3Q96RU7 358 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 ACE2Q9BYF1 805 aaPredicted RBP6.61□□□□□ -1.35
USP47-201ENST00000305481 PRKD2Q9BZL6 878 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 NOD2Q9HC29 1040 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 STOML2Q9UJZ1 356 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 FBXO5Q9UKT4 447 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 TBC1D30Q9Y2I9 924 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 INSL5Q9Y5Q6 135 aa6.61□□□□□ -1.35
USP47-201ENST00000305481 PTPRSQ13332 1948 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CHD7Q9P2D1 2997 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CDH23Q9H251 3354 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CFAP73A6NFT4 308 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 TARM1B6A8C7 271 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 TK2O00142 265 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CLDN11O75508 207 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 PAPSS2O95340 614 aaPredicted RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 CD160O95971 181 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 SERPINE1P05121 402 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 URODP06132 367 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 RALBP11234 206 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 LAG3P18627 525 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CDK18Q07002 472 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 ITGA9Q13797 1035 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 FSCBQ5H9T9 825 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 RABGAP1LQ5R372 815 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 C16orf59Q7L2K0 433 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CRLF3Q8IUI8 442 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 KCTD4Q8WVF5 259 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 PTCD3Q96EY7 689 aaKnown RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 PSKH2Q96QS6 385 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 OMDQ99983 421 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 MGME1Q9BQP7 344 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 EBF4Q9BQW3 602 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 SPON2Q9BUD6 331 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 RETREG1Q9H6L5 497 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 NMRAL1Q9HBL8 299 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 ARL8BQ9NVJ2 186 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 MARCH4Q9P2E8 410 aaPredicted RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 CPSF2Q9P2I0 782 aaKnown RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 ARL5AQ9Y689 179 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 KIAA0100Q14667 2235 aaKnown RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 ZNF195O14628 629 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CR2P20023 1033 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 TAS2R39P59534 338 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 TUBB3Q13509 450 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 THOC5Q13769 683 aaKnown RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 GALNT3Q14435 633 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 ZNF235Q14590 738 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 CYTH1Q15438 398 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 TAF12Q16514 161 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 UGP2Q16851 508 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 RBM20Q5T481 1227 aaKnown RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 ARMC3Q5W041 872 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 RAPH1Q70E73 1250 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 OTOP2Q7RTS6 562 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 SPATA6LQ8N4H0 392 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 SH3RF2Q8TEC5 729 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 FEM1CQ96JP0 617 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 NMUR2Q9GZQ4 415 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 LRMDAQ9H2I8 198 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 C11orf49Q9H6J7 331 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 SUDS3Q9H7L9 328 aaPredicted RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 ACSS2Q9NR19 701 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 SAR1AQ9NR31 198 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 MRPL17Q9NRX2 175 aaKnown RBP6.6□□□□□ -1.35
USP47-201ENST00000305481 TXLNGQ9NUQ3 528 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 PNPOQ9NVS9 261 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 DNAJC16Q9Y2G8 782 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 PLXNA4Q9HCM2 1894 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 KIAA1671Q9BY89 1806 aa6.6□□□□□ -1.35
USP47-201ENST00000305481 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 ILVBLA1L0T0 632 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 OR51F1A6NGY5 319 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 GFRA2O00451 464 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 FCHO1O14526 889 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 KIAA0355O15063 1070 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 BUD23O43709 281 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 CNPP09543 421 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 PIRTP0C851 137 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 PAMP19021 973 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 GRK2P25098 689 aa6.59□□□□□ -1.35
USP47-201ENST00000305481 LEPRP48357 1165 aaKnown RBP6.59□□□□□ -1.35
USP47-201ENST00000305481 RAB10P61026 200 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms