RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 GGA2Q9UJY4 613 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 MTO1Q9Y2Z2 717 aaKnown RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ANKRD65E5RJM6 399 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 SLC4A1P02730 911 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 BGNP21810 368 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CES1P23141 567 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CSKP41240 450 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ITIH4Q14624 930 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 TAF1BQ53T94 588 aaPredicted RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 FSCBQ5H9T9 825 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 RETSATQ6NUM9 610 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CCDC91Q7Z6B0 441 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 SH3RF2Q8TEC5 729 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 TSSK1BQ9BXA7 367 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 SLC46A2Q9BY10 475 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ACE2Q9BYF1 805 aaPredicted RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 MKS1Q9NXB0 559 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CHKBQ9Y259 395 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 RRP15Q9Y3B9 282 aaKnown RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 CCDC195A0A1B0GUA6 201 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 TMCC1O94876 653 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 NDST3O95803 873 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 MYOGP15173 224 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 DNAJB1P25685 340 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 HADHAP40939 763 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 PDE1CQ14123 709 aaPredicted RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 N4BP2L1Q5TBK1 243 aaPredicted RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ZNF697Q5TEC3 545 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 KYAT3Q6YP21 454 aaKnown RBP14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 Q6ZNB5 142 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 HTR3DQ70Z44 454 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ADAMTS19Q8TE59 1207 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 FEM1AQ9BSK4 669 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 RHOJQ9H4E5 214 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 PRKAG3Q9UGI9 489 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 DPP7Q9UHL4 492 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 ARL2BPQ9Y2Y0 163 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 PLXNA4Q9HCM2 1894 aa14.64□□□□□ -0.07
SHCBP1-201ENST00000303383 PIRTP0C851 137 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 EPHB1P54762 984 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 ZXDBP98169 803 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 RGS9BPQ6ZS82 235 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 RBM23Q86U06 439 aaKnown RBP14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 DENND6AQ8IWF6 608 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 GPATCH11Q8N954 259 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 LRRC3Q9BY71 257 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 CAB39LQ9H9S4 337 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 A0A096LPK6 155 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 GRM6O15303 877 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 EPOP01588 193 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 MPOP05164 745 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 RB1P06400 928 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 TEAD2Q15562 447 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 PPM1JQ5JR12 505 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 C16orf46Q6P387 395 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 PTAR1Q7Z6K3 402 aaPredicted RBP14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 SREK1Q8WXA9 508 aaKnown RBP14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 RANBP9Q96S59 729 aa14.63□□□□□ -0.07
SHCBP1-201ENST00000303383 LOC285095A0A1B0GVY8 99 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 EDF1O60869 148 aaKnown RBP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 RHOP08100 348 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 EPCAMP16422 314 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 PFKLP17858 780 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ALDH3A1P30838 453 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 IRS1P35568 1242 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ETV4P43268 484 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 CD151P48509 253 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ARMC3Q5W041 872 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 LPCAT1Q8NF37 534 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 E2F7Q96AV8 911 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 FBXO5Q9UKT4 447 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 STARD13Q9Y3M8 1113 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 HGSO14964 777 aaPredicted RBP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 PER2O15055 1255 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 TOP3BO95985 862 aaKnown RBP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 DDX6P26196 483 aaKnown RBP eCLIP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 MPP1Q00013 466 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 GRM3Q14832 879 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 CYTH1Q15438 398 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 SHKBP1Q8TBC3 707 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 TCEAL4Q96EI5 215 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ELMO2Q96JJ3 720 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 MECRQ9BV79 373 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ADGRE3Q9BY15 652 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 TREX1Q9NSU2 369 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 KIAA1522Q9P206 1035 aaPredicted RBP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 VPS51Q9UID3 782 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ARIH1Q9Y4X5 557 aaPredicted RBP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 GRXCR1A8MXD5 290 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 CRTAMO95727 393 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 CA3P07451 260 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 SLC1A2P43004 574 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 RGRP47804 291 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 ARF5P84085 180 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 CHI3L2Q15782 390 aa14.62□□□□□ -0.07
SHCBP1-201ENST00000303383 RTL10Q7L3V2 364 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms