RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 VCLP18206 1134 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 HPCAL1P37235 193 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 SGCGQ13326 291 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 PPM1JQ5JR12 505 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF655Q8N720 491 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF354BQ96LW1 612 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 PNMA5Q96PV4 448 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ASB8Q9H765 288 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 SOHLH2Q9NX45 425 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 NEO1Q92859 1461 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CCDC189A1A4V9 331 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 G3V2T6 193 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ZBTB14O43829 449 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 SHOX2O60902 331 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-201ENST00000301732 KDELR1P24390 212 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 PNPLA4P41247 253 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 SETMARQ53H47 684 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-201ENST00000301732 BHLHB9Q6PI77 547 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CAMK1DQ8IU85 385 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 FAM110BQ8TC76 370 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 S100ZQ8WXG8 99 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 LPPQ93052 612 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 SLC25A23Q9BV35 468 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 COLEC11Q9BWP8 271 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ANXA6P08133 673 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CDC42P60953 191 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 PPP3CAQ08209 521 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ITPK1Q13572 414 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 PRAMEF19Q5SWL8 479 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CLEC6AQ6EIG7 209 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 FAM98AQ8NCA5 519 aaKnown RBP12.44□□□□□ -0.42
ABCA3-201ENST00000301732 ANKRD27Q96NW4 1050 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 DDX4Q9NQI0 724 aaKnown RBP12.44□□□□□ -0.42
ABCA3-201ENST00000301732 POLLQ9UGP5 575 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 GLRA2P23416 452 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CRABP2P29373 138 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CNTN2Q02246 1040 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 IRF8Q02556 426 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 NET1Q7Z628 596 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-201ENST00000301732 OR8H3Q8N146 312 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 KBTBD7Q8WVZ9 684 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 CLASP1Q7Z460 1538 aa12.44□□□□□ -0.42
ABCA3-201ENST00000301732 RPL22P35268 128 aaKnown RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 XKR6Q5GH73 641 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 NBPF12Q5TAG4 269 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 PACS1Q6VY07 963 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 RASAL3Q86YV0 1011 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 WDR49Q8IV35 697 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 CLYBLQ8N0X4 340 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ZCCHC9Q8N567 271 aaKnown RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 MCOLN3Q8TDD5 553 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ENTPD4Q9Y227 616 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 RGL2O15211 777 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF7P17097 686 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ITPKAP23677 461 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 MMP13P45452 471 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 GRB14Q14449 540 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 GFOD2Q3B7J2 385 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 EXO5Q9H790 373 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 SPAG4Q9NPE6 437 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ST3GAL1Q11201 340 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 TIGD2Q4W5G0 525 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 DENND1CQ8IV53 801 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 COLGALT2Q8IYK4 626 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF615Q8N8J6 731 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 COPS5Q92905 334 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 PPP1R2P1Q96PQ5 205 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 PANX1Q96RD7 426 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 BARX2Q9UMQ3 279 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 DISP1Q96F81 1524 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 GNB5O14775 395 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 TEX28O15482 410 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 RNASEH1O60930 286 aaKnown RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 BCL2L1Q07817 233 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 FAM151BQ6UXP7 276 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 NAXEQ8NCW5 288 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 OR4A15Q8NGL6 344 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 LNX1Q8TBB1 728 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ERVK-5Q9HDB9 667 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 XPR1Q9UBH6 696 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ERGIC3Q9Y282 383 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 PCDHA11Q9Y5I1 949 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 UBE2QL1A1L167 161 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 NOBOXO60393 691 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 KRT33AO76009 404 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 SLITRK3O94933 977 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 OR56A5P0C7T3 313 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 SEMG2Q02383 582 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ZFP1Q6P2D0 407 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 CRTC3Q6UUV7 619 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF554Q86TJ5 538 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 MCFD2Q8NI22 146 aa12.43□□□□□ -0.42
ABCA3-201ENST00000301732 C11orf24Q96F05 449 aaPredicted RBP12.43□□□□□ -0.42
ABCA3-201ENST00000301732 PTNP21246 168 aa12.42□□□□□ -0.42
ABCA3-201ENST00000301732 KLRC2P26717 231 aa12.42□□□□□ -0.42
ABCA3-201ENST00000301732 ITGA1P56199 1179 aa12.42□□□□□ -0.42
ABCA3-201ENST00000301732 EVX2Q03828 476 aa12.42□□□□□ -0.42
ABCA3-201ENST00000301732 ZNF460Q14592 562 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms