RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TREX1Q9NSU2 369 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 CHD9Q3L8U1 2897 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 CCDC78A2IDD5 438 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 PYGBP11216 843 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 SPRP35270 261 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 RHOAP61586 193 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 SLC20A2Q08357 652 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 PLEKHG6Q3KR16 790 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 KIAA0930Q6ICG6 404 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 ESRP1Q6NXG1 681 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 STRA8Q7Z7C7 330 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 TMEM25Q86YD3 366 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 CELF5Q8N6W0 485 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 C12orf76Q8N812 135 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 KIAA1958Q8N8K9 716 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 RIN3Q8TB24 985 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 DENND1AQ8TEH3 1009 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 IRF7Q92985 503 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 KLF6Q99612 283 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 BBS2Q9BXC9 721 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 IQCGQ9H095 443 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 SPHK2Q9NRA0 654 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 IARS2Q9NSE4 1012 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 SLC17A6Q9P2U8 582 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 PSAT1Q9Y617 370 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 MYO7AQ13402 2215 aa15.86■□□□□ 0.13
HERPUD1-201ENST00000300302 VAPBO95292 243 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 PENKP01210 267 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 ITGA2BP08514 1039 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 WEE1P30291 646 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 SEC24CP53992 1094 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 CSE1LP55060 971 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 PDE1BQ01064 536 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 MSLNQ13421 630 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 CBX2Q14781 532 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 SMAD1Q15797 465 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 CNGA3Q16281 694 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 UGP2Q16851 508 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 TSTD2Q5T7W7 516 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 SH2D5Q6ZV89 423 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 ITFG1Q8TB96 612 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 CHMP6Q96FZ7 201 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 TRIB3Q96RU7 358 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 AGAP2Q99490 1192 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 RBBP8Q99708 897 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 PAIP2Q9BPZ3 127 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 TDRD1Q9BXT4 1180 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 ADGRE3Q9BY15 652 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 MLXIPLQ9NP71 852 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 ABCB8Q9NUT2 735 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 LHX3Q9UBR4 397 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 CLEC4EQ9ULY5 219 aa15.85■□□□□ 0.13
HERPUD1-201ENST00000300302 HMX2A2RU54 273 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 MROH6A6NGR9 719 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 NEDD8-MDP1E9PL57 170 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 NDUFAB1O14561 156 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 COPEO14579 308 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 TIMM44O43615 452 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 RFPL1O75677 317 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 FAM107AO95990 144 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CD70P32970 193 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 THOC5Q13769 683 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 KCNC3Q14003 757 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 GALNT3Q14435 633 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 HHATQ5VTY9 493 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 RNF135Q8IUD6 432 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CNTN4Q8IWV2 1026 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 GDAP1Q8TB36 358 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 TCP10LQ8TDR4 215 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 ACMSDQ8TDX5 336 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CKAP2Q8WWK9 683 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 PEX13Q92968 403 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 MRPL38Q96DV4 380 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 FAM167BQ9BTA0 163 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 FCF1Q9Y324 198 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 ATG2AQ2TAZ0 1938 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 ASMTLO95671 621 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CCNFP41002 786 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 ARCN1P48444 511 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CCT5P48643 541 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 LIMK2P53671 638 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 PITRM1Q5JRX3 1037 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 NCEH1Q6PIU2 408 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CALML6Q8TD86 181 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 BRSK1Q8TDC3 778 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 BLOC1S5Q8TDH9 187 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 TIFAQ96CG3 184 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 RMDN1Q96DB5 314 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 MAGEB18Q96M61 343 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CCT8L2Q96SF2 557 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 MKS1Q9NXB0 559 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.84■□□□□ 0.135e-9■■■□□ 15.6
HERPUD1-201ENST00000300302 SLC2A6Q9UGQ3 507 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 CHKBQ9Y259 395 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 RAI2Q9Y5P3 530 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 MYLKQ15746 1914 aa15.84■□□□□ 0.13
HERPUD1-201ENST00000300302 MT-CO1P00395 513 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 TYRP14679 529 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 HLA-FP30511 346 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms