RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 ATPAF2Q8N5M1 289 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 NETO1Q8TDF5 533 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
HMGB2-201ENST00000296503 KLHL32Q96NJ5 620 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 EDEM2Q9BV94 578 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 GTPBP2Q9BX10 602 aaKnown RBP12.25□□□□□ -0.45
HMGB2-201ENST00000296503 HDAC8Q9BY41 377 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 FSCN3Q9NQT6 498 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 DDX56Q9NY93 547 aaKnown RBP12.25□□□□□ -0.45
HMGB2-201ENST00000296503 LHX3Q9UBR4 397 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 ADGRG1Q9Y653 693 aa12.25□□□□□ -0.45
HMGB2-201ENST00000296503 NYNRINQ9P2P1 1898 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 LNP1A1A4G5 178 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 C16orf96A6NNT2 1141 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 INSIG1O15503 277 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 SHOX2O60902 331 aaPredicted RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 KRT1P04264 644 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 IGHV4-34P06331 123 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 SYPP08247 313 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 ENGP17813 658 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 ITGB7P26010 798 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 MAT2AP31153 395 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 CCR5P51681 352 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 NEK3P51956 506 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 RFTN1Q14699 578 aaPredicted RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 LBRQ14739 615 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 CASP8Q14790 479 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 ZNF805Q5CZA5 627 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 DAAM2Q86T65 1068 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 TSEN2Q8NCE0 465 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 ZNF599Q96NL3 588 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 RNF157Q96PX1 679 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 OSBPL1AQ9BXW6 950 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 GOLPH3Q9H4A6 298 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 REXO2Q9Y3B8 237 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 DUSP10Q9Y6W6 482 aa12.24□□□□□ -0.45
HMGB2-201ENST00000296503 TNRC6BQ9UPQ9 1833 aaKnown RBP12.24□□□□□ -0.45
HMGB2-201ENST00000296503 A0A1W2PPC4 97 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 C4orf47A7E2U8 309 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 MAFKO60675 156 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 RNGTTO60942 597 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 MAP3K6O95382 1288 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 MAPK8P45983 427 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CSNK1EP49674 416 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 RENBPP51606 427 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 VAV2P52735 878 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TAS2R38P59533 333 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 SLC10A7Q0GE19 358 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 ZNF235Q14590 738 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PAFAH1B3Q15102 231 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 MAP9Q49MG5 647 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 STPG1Q5TH74 334 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 NCBP2-AS2Q69YL0 99 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 ADAT2Q7Z6V5 191 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TTC7BQ86TV6 843 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 LRRC49Q8IUZ0 686 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 BBS5Q8N3I7 341 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PAF1Q8N7H5 531 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TPCN2Q8NHX9 752 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 FAM131CQ96AQ9 280 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 RMDN1Q96DB5 314 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CALR3Q96L12 384 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CPEB1Q9BZB8 566 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CAPN10Q9HC96 672 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TM9SF3Q9HD45 589 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TMEM9BQ9NQ34 198 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 SEPT3Q9UH03 358 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 SALL4Q9UJQ4 1053 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TPX2Q9ULW0 747 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CTAGE9A4FU28 777 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 NEMP1O14524 444 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 MFSD11O43934 449 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 ADRB3P13945 408 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 SCNN1BP51168 640 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 AFF3P51826 1226 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PPP2CBP62714 309 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PPP2CAP67775 309 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 NSUN2Q08J23 767 aaKnown RBP eCLIP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 KIF5AQ12840 1032 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 GRM3Q14832 879 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TEAD4Q15561 434 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 UAP1L1Q3KQV9 507 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CFAP58Q5T655 872 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 TMCO4Q5TGY1 634 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 NEK5Q6P3R8 708 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PARS2Q7L3T8 475 aaKnown RBP12.23□□□□□ -0.45
HMGB2-201ENST00000296503 CCDC91Q7Z6B0 441 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 RFX6Q8HWS3 928 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 PQLC3Q8N755 202 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 C1orf216Q8TAB5 229 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 KLK6Q92876 244 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 FAF2Q96CS3 445 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 FEM1CQ96JP0 617 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 DESI2Q9BSY9 194 aa12.23□□□□□ -0.45
HMGB2-201ENST00000296503 LACRTQ9GZZ8 138 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms