RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SLC17A7Q9P2U7 560 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SORCS3Q9UPU3 1222 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 FGF1P05230 155 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 ASGR1P07306 291 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 PSMB9P28065 219 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 GABRR2P28476 465 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 CMC1Q7Z7K0 106 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 MAB21L3Q8N8X9 362 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 RMND5BQ96G75 393 aaPredicted RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 ARMC7Q9H6L4 198 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SALL4Q9UJQ4 1053 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 FBXO5Q9UKT4 447 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 MAGEC1O60732 1142 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SLC5A3P53794 718 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 TCEA2Q15560 299 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 FAM151BQ6UXP7 276 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SERPINA13PQ6UXR4 307 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 ALYREFQ86V81 257 aaKnown RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 RAP2CQ9Y3L5 183 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 INTS6LQ5JSJ4 861 aaKnown RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 FUKQ8N0W3 1084 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 OR6K2Q8NGY2 324 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 CXCL14O95715 111 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 DLGAP3O95886 979 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SNRPB2P08579 225 aaKnown RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 ZBTB48P10074 688 aaPredicted RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 HNRNPLP14866 589 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 CDKN2BP42772 138 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 PPP1R15BQ5SWA1 713 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 CNSTQ6PJW8 725 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SCIMPQ6UWF3 145 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 TTYH3Q9C0H2 523 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SLCO1B3Q9NPD5 702 aa17.35■□□□□ 0.37
CDCP1-201ENST00000296129 CAB39Q9Y376 341 aaPredicted RBP17.35■□□□□ 0.37
CDCP1-201ENST00000296129 SELPP16109 830 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 FAM187BQ17R55 369 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 ZNF276Q8N554 614 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 C9orf16Q9BUW7 83 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 BMP10O95393 424 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PIK3R1P27986 724 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 ATAD1Q8NBU5 361 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 FBXO30Q8TB52 745 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 HIC2Q96JB3 615 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 APOBEC3GQ9HC16 384 aaKnown RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 CYP3A5P20815 502 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PPM1AP35813 382 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 ARHGAP17Q68EM7 881 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 POTEHQ6S545 545 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 SLC24A5Q71RS6 500 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 METTL3Q86U44 580 aaKnown RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 CDYL2Q8N8U2 506 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 LINGO1Q96FE5 620 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 BTN2A3PQ96KV6 586 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 ANKRD27Q96NW4 1050 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 KPNA5O15131 536 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 NET1Q7Z628 596 aaPredicted RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 CDK20Q8IZL9 346 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 CCDC185Q8N715 623 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PLD5Q8N7P1 536 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 LRRC57Q8N9N7 239 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 SPPL2BQ8TCT7 592 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 AGO3Q9H9G7 860 aaKnown RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 ZFP14Q9HCL3 533 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 WRAP73Q9P2S5 460 aaPredicted RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PRKAG3Q9UGI9 489 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 NDOR1Q9UHB4 597 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PACSIN3Q9UKS6 424 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 TMEM88BA6NKF7 163 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 FAM155BO75949 473 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 CD48P09326 243 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 CCDC159P0C7I6 412 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PABPC1P11940 636 aaKnown RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 GBE1Q04446 702 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 GPRIN3Q6ZVF9 776 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 DDHD1Q8NEL9 900 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 SLC12A4Q9UP95 1085 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 MTF2Q9Y483 593 aaPredicted RBP17.34■□□□□ 0.37
CDCP1-201ENST00000296129 PCDHB9Q9Y5E1 797 aa17.34■□□□□ 0.37
CDCP1-201ENST00000296129 SRRM3A6NNA2 597 aaPredicted RBP17.33■□□□□ 0.37
CDCP1-201ENST00000296129 E9PAM4 449 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 C1QTNF3-AMACRE9PGA6 284 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 CHRNB2P17787 502 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 CRATP43155 626 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 RXRGP48443 463 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 CES5AQ6NT32 575 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 CASP12Q6UXS9 341 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.33■□□□□ 0.37
CDCP1-201ENST00000296129 RAD21L1Q9H4I0 556 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 ANAPC2Q9UJX6 822 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 IL1BP01584 269 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 FTH1P02794 183 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 GLUD2P49448 558 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 ABRQ12979 859 aa17.33■□□□□ 0.37
CDCP1-201ENST00000296129 MSL3Q8N5Y2 521 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms