RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 A0A1W2PQY0 241 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 KCNU1A8MYU2 1149 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 SLC41A1Q8IVJ1 513 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 TMCO5AQ8N6Q1 288 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 INPP5DQ92835 1189 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 CATSPER2Q96P56 530 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 FAIM2Q9BWQ8 316 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 SEMA4BQ9NPR2 832 aaPredicted RBP17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 RNF186Q9NXI6 227 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 NDRG2Q9UN36 371 aaKnown RBP17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 CACNA1FO60840 1977 aa17.84■□□□□ 0.45
CDC42EP3-201ENST00000295324 INPP4BO15327 924 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 ATP5F1P24539 256 aaPredicted RBP17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 DAB2IPQ5VWQ8 1189 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 RERGQ96A58 199 aaPredicted RBP17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 DMAC2Q9NW81 257 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 KCNE2Q9Y6J6 123 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 LRRC72A6NJI9 287 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 CD3EAPO15446 510 aaKnown RBP17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 PIGRP01833 764 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 IMPDH2P12268 514 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 PSMD8P48556 350 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 SERPINB10P48595 397 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 NOMO1Q15155 1222 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 FAM151BQ6UXP7 276 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 FLCNQ8NFG4 579 aa17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 NDRG1Q92597 394 aaKnown RBP17.83■□□□□ 0.45
CDC42EP3-201ENST00000295324 RASSF10A6NK89 507 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 PER2O15055 1255 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 GSTM1P09488 218 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ATP6V1C1P21283 382 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 DRG2P55039 364 aaKnown RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 MTDHQ86UE4 582 aaKnown RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 PTGR2Q8N8N7 351 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 KRT84Q9NSB2 600 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ATAD3AQ9NVI7 634 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 EVLQ9UI08 416 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 hCG_2014768A0A024R1R8 64 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 AGRPO00253 132 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 MLYCDO95822 493 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ALADP13716 330 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF23P17027 643 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 TFEBP19484 476 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 DGKGP49619 791 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 GRSF1Q12849 480 aaKnown RBP eCLIP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 KYQ8NBH2 561 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF296Q8WUU4 475 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZDHHC4Q9NPG8 344 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 ARIH1Q9Y4X5 557 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 RGPD8O14715 1765 aaPredicted RBP17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 SP2Q02086 613 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM187BQ17R55 369 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 PHYKPLQ8IUZ5 450 aa17.83■□□□□ 0.44
CDC42EP3-201ENST00000295324 SNED1Q8TER0 1413 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 PIGNO95427 931 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 NDST3O95803 873 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 BLVRAP53004 296 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 ABRQ12979 859 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 FASTKQ14296 549 aaKnown RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZCWPW2Q504Y3 356 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 TMC5Q6UXY8 1006 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 PAGE2Q7Z2X7 111 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 TAC4Q86UU9 113 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 RIN3Q8TB24 985 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF398Q8TD17 642 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 TEPSINQ96N21 525 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCDC154A6NI56 674 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 SH3BGRLO75368 114 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 POP4O95707 220 aaKnown RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 ZNF844Q08AG5 666 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 CAPRIN2Q6IMN6 1127 aaKnown RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 MON1BQ7L1V2 547 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 SAPCD2Q86UD0 394 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 ACMSDQ8TDX5 336 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 GLMNQ92990 594 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 FERD3LQ96RJ6 166 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 POLMQ9NP87 494 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 RAB21Q9UL25 225 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 RAI2Q9Y5P3 530 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 STBD1O95210 358 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM163BP0C2L3 166 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCND1P24385 295 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 RAB10P61026 200 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 PWP1Q13610 501 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 PHC3Q8NDX5 983 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 OR14C36Q8NHC7 312 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 KCTD14Q9BQ13 255 aaPredicted RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM153BP0C7A2 387 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 HSPA13P48723 471 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 FAM153CQ494X1 144 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 SLC51AQ86UW1 340 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 TMEM132CQ8N3T6 1108 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 DDX28Q9NUL7 540 aaKnown RBP17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 COMMD8Q9NX08 183 aa17.82■□□□□ 0.44
CDC42EP3-201ENST00000295324 C15orf38-AP3S2A0A0A6YYH1 394 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 LRCH4O75427 683 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 NUDT14O95848 222 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCNCP24863 283 aa17.81■□□□□ 0.44
CDC42EP3-201ENST00000295324 CCDC92Q53HC0 331 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms