RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NSMCE4AQ9NXX6 385 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 YJEFN3A6XGL0 299 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 NRP2O60462 931 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 IL10P22301 178 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 ATP5F1P24539 256 aaPredicted RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 CD151P48509 253 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 NUP107P57740 925 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 PRKCQQ04759 706 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 PIWIL4Q7Z3Z4 852 aaKnown RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 TMEM126BQ8IUX1 230 aa14.84□□□□□ -0.03
CCNF-201ENST00000293968 RPL10LQ96L21 214 aaKnown RBP14.84□□□□□ -0.03
CCNF-201ENST00000293968 AURKAO14965 403 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 ANGPT2O15123 496 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 HADHAP40939 763 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 SLC1A2P43004 574 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 YAP1P46937 504 aaKnown RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 TAF6P49848 677 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 SQLEQ14534 574 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 PAFAH1B3Q15102 231 aaKnown RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 NOMO2Q5JPE7 1267 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 DUS1LQ6P1R4 473 aaKnown RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 ARHGAP36Q6ZRI8 547 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 FASTKD5Q7L8L6 764 aaKnown RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 CHST15Q7LFX5 561 aaPredicted RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 APOBEC3FQ8IUX4 373 aaKnown RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 FIBCD1Q8N539 461 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 LZICQ8WZA0 190 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 MAML3Q96JK9 1138 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 SOX17Q9H6I2 414 aaPredicted RBP14.83□□□□□ -0.03
CCNF-201ENST00000293968 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.03
CCNF-201ENST00000293968 TMX2-CTNND1H3BSU7 103 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 DCLK1O15075 740 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 CHRNA4P43681 627 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 SULT2A1Q06520 285 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 RBM20Q5T481 1227 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 SPPL2BQ8TCT7 592 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 GFM2Q969S9 779 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 TBL1YQ9BQ87 522 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 SLC25A23Q9BV35 468 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 ALG9Q9H6U8 611 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 POLR1BQ9H9Y6 1135 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 TBC1D23Q9NUY8 699 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 UBQLN1Q9UMX0 589 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 EVPLQ92817 2033 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 A0A087WXM4 84 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 H3BRB1 525 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 MOCS2O96007 188 aaPredicted RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 NPR3P17342 541 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 PRKAA2P54646 552 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 CBLBQ13191 982 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 PLCL1Q15111 1095 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 VPS26BQ4G0F5 336 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 WSCD1Q658N2 575 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 ATPAF2Q8N5M1 289 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 SHCBP1Q8NEM2 672 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 C12orf43Q96C57 262 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 MRPL57Q9BQC6 102 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 C1QTNF1Q9BXJ1 281 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 OSBPL6Q9BZF3 934 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 TUT1Q9H6E5 874 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 PLGRKTQ9HBL7 147 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 SPON1Q9HCB6 807 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 TXNRD2Q9NNW7 524 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 SUCOQ9UBS9 1254 aaKnown RBP14.83□□□□□ -0.04
CCNF-201ENST00000293968 VPS28Q9UK41 221 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 TRHDEQ9UKU6 1024 aa14.83□□□□□ -0.04
CCNF-201ENST00000293968 INPP4BO15327 924 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 CLOCKO15516 846 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 KCNA5P22460 613 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 ADSLP30566 484 aaPredicted RBP14.82□□□□□ -0.04
CCNF-201ENST00000293968 SLC7A1P30825 629 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 NSUN2Q08J23 767 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCNF-201ENST00000293968 ANKDD1AQ495B1 522 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 XKR5Q6UX68 686 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 LRRC43Q8N309 656 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 PDZD8Q8NEN9 1154 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 ERLEC1Q96DZ1 483 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 ZNF560Q96MR9 790 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 TCF12Q99081 682 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 OLAHQ9NV23 265 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 SLC8A2Q9UPR5 921 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 FBP2O00757 339 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 XPOTO43592 962 aaKnown RBP14.82□□□□□ -0.04
CCNF-201ENST00000293968 PAMP19021 973 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 PCID2Q5JVF3 399 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 PKN3Q6P5Z2 889 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 SLC27A1Q6PCB7 646 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 LINC00523Q86TU6 105 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 PCYOX1LQ8NBM8 494 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 FBXL20Q96IG2 436 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 SLC45A3Q96JT2 553 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 ZNF597Q96LX8 424 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 NPY6RQ99463 290 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 DUSP16Q9BY84 665 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 SLC22A2O15244 555 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 CPB1P15086 417 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 RPS12P25398 132 aaKnown RBP14.82□□□□□ -0.04
CCNF-201ENST00000293968 INPP5AQ14642 412 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 GRIK4Q16099 956 aa14.82□□□□□ -0.04
CCNF-201ENST00000293968 DCAF4L1Q3SXM0 396 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms