RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 PLGRKTQ9HBL7 147 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 RPN2P04844 631 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 MAXP61244 160 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 HSF2Q03933 536 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 EFR3AQ14156 821 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 PEG10Q86TG7 708 aaKnown RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 GPR152Q8TDT2 470 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CLPTM1LQ96KA5 538 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 RRAGCQ9HB90 399 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 PAPSS1O43252 624 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CHRNGP07510 517 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 VIL1P09327 827 aaKnown RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 MAMLD1Q13495 774 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 SEMA5AQ13591 1074 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 RBM43Q6ZSC3 357 aaKnown RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 CDYL2Q8N8U2 506 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 LNX1Q8TBB1 728 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 SYTL5Q8TDW5 730 aaPredicted RBP16.24■□□□□ 0.19
SSRP1-202ENST00000293880 ULBP1Q9BZM6 244 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 MTFR1LQ9H019 292 aa16.24■□□□□ 0.19
SSRP1-202ENST00000293880 G3V2T6 193 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 OR10H3O60404 316 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 TIPRLO75663 272 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 FAM155BO75949 473 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 GTF2A2P52657 109 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 INSCQ1MX18 579 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 DMRTB1Q96MA1 342 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 TBC1D24Q9ULP9 559 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 BAIAP2Q9UQB8 552 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 NPEPPSL1A6NEC2 478 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 LIASO43766 372 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 TOP3BO95985 862 aaKnown RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 CYP2A6P11509 494 aaPredicted RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 AUHQ13825 339 aaKnown RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ZNF268Q14587 947 aaPredicted RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 MIIPQ5JXC2 388 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ARMC12Q5T9G4 340 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 DENND5AQ6IQ26 1287 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 C4orf19Q8IY42 314 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ANKRD13AQ8IZ07 590 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 FAM98AQ8NCA5 519 aaKnown RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 MYDGFQ969H8 173 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ANKRD27Q96NW4 1050 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 NKIRAS2Q9NYR9 191 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 EML1O00423 815 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 TRUB2O95900 331 aaKnown RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 CBX3Q13185 183 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 SDHAF4Q5VUM1 108 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 CAMK1DQ8IU85 385 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 GMCL1P1Q8NEA9 526 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 C17orf50Q8WW18 174 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 IL17RBQ9NRM6 502 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 MLXQ9UH92 298 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 HBS1LQ9Y450 684 aaKnown RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 FAM92AA1XBS5 289 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ZNF879B4DU55 563 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 KPNA6O60684 536 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 UNC5CO95185 931 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 NR4A1P22736 598 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 AP1S2P56377 157 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 BACE1P56817 501 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ACSM2AQ08AH3 577 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 XKR6Q5GH73 641 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ACSM2BQ68CK6 577 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 RNF43Q68DV7 783 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 CXorf57Q6NSI4 855 aaKnown RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 PALB2Q86YC2 1186 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 SCAIQ8N9R8 606 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ABHD14A-ACY1A0A1B0GW23 586 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 BUD31P41223 144 aaPredicted RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
SSRP1-202ENST00000293880 SLCO6A1Q86UG4 719 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 ULK2Q8IYT8 1036 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 OR8H1Q8NGG4 311 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 OR52K2Q8NGK3 314 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 LRMDAQ9H2I8 198 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 TRHDEQ9UKU6 1024 aa16.23■□□□□ 0.19
SSRP1-202ENST00000293880 SH3D21A4FU49 640 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 ROR2Q01974 943 aaKnown RBP16.22■□□□□ 0.19
SSRP1-202ENST00000293880 MFSD10Q14728 455 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 POMZP3Q6PJE2 187 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 PSTKQ8IV42 348 aaKnown RBP16.22■□□□□ 0.19
SSRP1-202ENST00000293880 ALLCQ8N6M5 410 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 PURBQ96QR8 312 aaKnown RBP16.22■□□□□ 0.19
SSRP1-202ENST00000293880 ITGB1BP2Q9UKP3 347 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 VPS4AQ9UN37 437 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 UBE2QL1A1L167 161 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 LRRC14BA6NHZ5 514 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 HACD1B0YJ81 288 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 DGKAP23743 735 aa16.22■□□□□ 0.19
SSRP1-202ENST00000293880 PRKAA2P54646 552 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms