RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GPS1Q13098 491 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 LINC00523Q86TU6 105 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 NAT8LQ8N9F0 302 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 PRCCQ92733 491 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 IMP4Q96G21 291 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 EBF3Q9H4W6 596 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 COG4Q9H9E3 785 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 TLK1Q9UKI8 766 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 DOCK6Q96HP0 2047 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CHD7Q9P2D1 2997 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 J3KR12 359 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 HLA-DQB2P05538 268 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 INHBAP08476 426 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 EPB42P16452 691 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CA4P22748 312 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 MZF1P28698 734 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CD68P34810 354 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 AP1S1P61966 158 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 MTM1Q13496 603 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CYTH1Q15438 398 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 GKAP1Q5VSY0 366 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 KCTD11Q693B1 232 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 ASTLQ6HA08 431 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 RNF135Q8IUD6 432 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 PCDH20Q8N6Y1 951 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 GORASP1Q9BQQ3 440 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CAPN10Q9HC96 672 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 EPB41L5Q9HCM4 733 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 DEC1Q9P2X7 70 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 LHX3Q9UBR4 397 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 WASH3PC4AMC7 463 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 ALOX15BO15296 676 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 ATP5BP06576 529 aaKnown RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 TSHRP16473 764 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CR2P20023 1033 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 ECHS1P30084 290 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 GRM2Q14416 872 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 HSF5Q4G112 596 aaPredicted RBP8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 IZUMO3Q5VZ72 239 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 TRIM68Q6AZZ1 485 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 MICALCLQ6ZW33 695 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 SPATA24Q86W54 205 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CAVIN3Q969G5 261 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 EGFL8Q99944 293 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 BRD9Q9H8M2 597 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 THEGQ9P2T0 379 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 CLEC4EQ9ULY5 219 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 ERVW-1Q9UQF0 538 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 SPAG17Q6Q759 2223 aa8.53□□□□□ -1.04
PTPDC1-201ENST00000288976 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 A0A1W2PQ67 120 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 AP2A1O95782 977 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 CD160O95971 181 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 SRFP11831 508 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 HNRNPLP14866 589 aaKnown RBP eCLIP8.52□□□□□ -1.041e-8■■■□□ 16.4
PTPDC1-201ENST00000288976 CALRP27797 417 aaKnown RBP8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 MRPS25P82663 173 aaKnown RBP8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 ECT2LQ008S8 904 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 PTK2BQ14289 1009 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 EMBQ6PCB8 327 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 CCNI2Q6ZMN8 369 aaPredicted RBP8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 APCDD1Q8J025 514 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 SH2D3CQ8N5H7 860 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 ARFGAP2Q8N6H7 521 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 CPT1BQ92523 772 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 FBRSQ9HAH7 460 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 KCNK12Q9HB15 430 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 XAB2Q9HCS7 855 aaKnown RBP8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 VPS18Q9P253 973 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 INTS6Q9UL03 887 aaKnown RBP8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 DUSP12Q9UNI6 340 aa8.52□□□□□ -1.04
PTPDC1-201ENST00000288976 CCDC151A5D8V7 595 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 TULP3O75386 442 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 APODP05090 189 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 MAGEA3P43357 314 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 PRAMEP78395 509 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SKOR1P84550 965 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SH2D4BQ5SQS7 431 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 MBLAC2Q68D91 279 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ZDHHC24Q6UX98 284 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 C12orf40Q86WS4 652 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 AENQ8WTP8 325 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 UCMAQ8WVF2 138 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 MRGPRX3Q96LB0 322 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SRPK1Q96SB4 655 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 C19orf43Q9BQ61 176 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 CPEB1Q9BZB8 566 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 RBM22Q9NW64 420 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ARIH1Q9Y4X5 557 aaPredicted RBP8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 CBX4O00257 560 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 TMCC1O94876 653 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ADRA1AP35348 466 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ENPP2Q13822 863 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 SLMAPQ14BN4 828 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 ELF2Q15723 593 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 MFSD4BQ5TF39 518 aa8.52□□□□□ -1.05
PTPDC1-201ENST00000288976 CNPY4Q8N129 248 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms