RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 DDIT4Q9NX09 232 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 TMEM161AQ9NX61 479 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 HCSTQ9UBK5 93 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 TRHDEQ9UKU6 1024 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 VANGL2Q9ULK5 521 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 TIMM13Q9Y5L4 95 aaPredicted RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 SDR42E2A6NKP2 422 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 RNF103O00237 685 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 PRMT3O60678 531 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 SPAG7O75391 227 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 UPP2O95045 317 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 METTL18O95568 372 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 SLC4A1P02730 911 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 FYNP06241 537 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 RPS2P15880 293 aaKnown RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 TAC1P20366 129 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 M6PRP20645 277 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 DNAJB2P25686 324 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 RPA3P35244 121 aaPredicted RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 TMED10P49755 219 aaKnown RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 WDR4P57081 412 aaKnown RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 PPARDQ03181 441 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 YWHAHQ04917 246 aaPredicted RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 SLC18A2Q05940 514 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 IFRD2Q12894 506 aaPredicted RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 DNAJC3Q13217 504 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 MYLK3Q32MK0 819 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 C6orf183Q5T699 404 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 RNF43Q68DV7 783 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 ITPRIPL1Q6GPH6 555 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 NPAS4Q8IUM7 802 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 C4orf33Q8N1A6 199 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 BANPQ8N9N5 519 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 CCNYQ8ND76 341 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 P2RY11Q96G91 374 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 APOPT1Q96IL0 206 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 KCNK16Q96T55 309 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 PKMYT1Q99640 499 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 RTP3Q9BQQ7 232 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 GPATCH1Q9BRR8 931 aaKnown RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 PRO3102Q9H379 93 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 C8orf33Q9H7E9 229 aaPredicted RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 C12orf4Q9NQ89 552 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 GRID1Q9ULK0 1009 aa7.67□□□□□ -1.18
TRIM42-201ENST00000286349 MRPS23Q9Y3D9 190 aaKnown RBP7.67□□□□□ -1.18
TRIM42-201ENST00000286349 COL4A4P53420 1690 aaPredicted RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 TSC2P49815 1807 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 COL4A6Q14031 1691 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 SYNJ2BP-COX16A0A087WUM0 186 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 GRXCR1A8MXD5 290 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 PRRT4C9JH25 899 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 PSMD3O43242 534 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 LPXNO60711 386 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 BPNT1O95861 308 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ASLP04424 464 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ITGA2BP08514 1039 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 VAV1P15498 845 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ERCC2P18074 760 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 NRLP54845 237 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 EFTUD2Q15029 972 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 FYB2Q5VWT5 728 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 BSPRYQ5W0U4 402 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 STEAP4Q687X5 459 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ANO7Q6IWH7 933 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 HFE2Q6ZVN8 426 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 JAZF1Q86VZ6 243 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 SPATA24Q86W54 205 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 IGDCC3Q8IVU1 814 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 CCDC63Q8NA47 563 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ZNF398Q8TD17 642 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 NDRG1Q92597 394 aaKnown RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 TTC17Q96AE7 1141 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 EFHD2Q96C19 240 aaPredicted RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ZNF689Q96CS4 500 aaPredicted RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 HDAC11Q96DB2 347 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 FUBP3Q96I24 572 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 SIGLEC10Q96LC7 697 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 RC3H2Q9HBD1 1191 aaKnown RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ARHGEF38Q9NXL2 777 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 COX16Q9P0S2 106 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 CACNG4Q9UBN1 327 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 TMEM5Q9Y2B1 443 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 INPP5FQ9Y2H2 1132 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 PCDHB7Q9Y5E2 793 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 A0A1W2PPM1 405 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 A6NCN8 305 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 CFAP73A6NFT4 308 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 FAM159BA6NKW6 160 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 SNTNA6NMZ2 147 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 FGF10O15520 208 aaPredicted RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 AVILO75366 819 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 FGF18O76093 207 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ALDH1A2O94788 518 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 DDHD2O94830 711 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 PGAM1P18669 254 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 TRIM23P36406 574 aa7.66□□□□□ -1.18
TRIM42-201ENST00000286349 ADARP55265 1226 aaKnown RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 NFE2Q16621 373 aaPredicted RBP7.66□□□□□ -1.18
TRIM42-201ENST00000286349 TJAP1Q5JTD0 557 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms