RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ARNT2Q9HBZ2 717 aa19.11■□□□□ 0.65
PDLIM3-202ENST00000284770 SAYSD1Q9NPB0 183 aa19.11■□□□□ 0.65
PDLIM3-202ENST00000284770 NINJ2Q9NZG7 142 aa19.11■□□□□ 0.65
PDLIM3-202ENST00000284770 THAP10Q9P2Z0 257 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-202ENST00000284770 EVLQ9UI08 416 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-202ENST00000284770 ARIH1Q9Y4X5 557 aaPredicted RBP19.11■□□□□ 0.65
PDLIM3-202ENST00000284770 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 ALOX15BO15296 676 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 TTC4O95801 387 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 NUDT17P0C025 328 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 RECQLP46063 649 aaPredicted RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 ZNF234Q14588 700 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 FASTKD3Q14CZ7 662 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 MYLK3Q32MK0 819 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 BBS9Q3SYG4 887 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 FNDC3BQ53EP0 1204 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 DNAJC21Q5F1R6 531 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 DENND5AQ6IQ26 1287 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 DPY19L3Q6ZPD9 716 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 RYBPQ8N488 228 aaPredicted RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 OR2A12Q8NGT7 310 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 OR6K2Q8NGY2 324 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 ZBTB9Q96C00 473 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 IFT43Q96FT9 208 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 MSANTD3Q96H12 275 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 TDRD1Q9BXT4 1180 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 TMEM245Q9H330 911 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 PIH1D1Q9NWS0 290 aaKnown RBP19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 HCN2Q9UL51 889 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 PCDHGC4Q9Y5F7 938 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 RAI2Q9Y5P3 530 aa19.1■□□□□ 0.65
PDLIM3-202ENST00000284770 K7EQS6 105 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 BNIP3LO60238 219 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 POP4O95707 220 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 CCNHP51946 323 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 SLC29A2Q14542 456 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 E2F5Q15329 346 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 SLC1A5Q15758 541 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 KYNUQ16719 465 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 SLC44A4Q53GD3 710 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 TMEM196Q5HYL7 178 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 IER5LQ5T953 404 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 LRIG3Q6UXM1 1119 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 ZBED8Q8IZ13 594 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 EZH1Q92800 747 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 PTPRN2Q92932 1015 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 TRIB3Q96RU7 358 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 WDR83Q9BRX9 315 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 CPEB1Q9BZB8 566 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 DUSP12Q9UNI6 340 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 MYO10Q9HD67 2058 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 WASH3PC4AMC7 463 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 BANF1O75531 89 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 HNRNPLP14866 589 aaKnown RBP eCLIP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 CA4P22748 312 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 SESN2P58004 480 aaPredicted RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 RAD51Q06609 339 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 PON2Q15165 354 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 HNRNPA1L2Q32P51 320 aaKnown RBP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 DENND2CQ68D51 928 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 AGGF1Q8N302 714 aaeCLIP19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 OR2W6PQ8NHA6 318 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 VOPP1Q96AW1 172 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 LRRC39Q96DD0 335 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 SIGLEC10Q96LC7 697 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 C9orf72Q96LT7 481 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 TUBGCP5Q96RT8 1024 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 ATP13A3Q9H7F0 1226 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 BFARQ9NZS9 450 aa19.09■□□□□ 0.65
PDLIM3-202ENST00000284770 C19orf67A6NJJ6 358 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 SDR42E2A6NKP2 422 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 NPC1O15118 1278 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 PRLP01236 227 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 ATXN1LP0C7T5 689 aaKnown RBP19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 HLA-DPA1P20036 260 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 DRD1P21728 446 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 GKP32189 559 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 CHRNA4P43681 627 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 NPY2RP49146 381 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 FAM193AP78312 1265 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 BCL2L1Q07817 233 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 GRSF1Q12849 480 aaKnown RBP eCLIP19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 TRAF2Q12933 501 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 GRM3Q14832 879 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 HP1BP3Q5SSJ5 553 aaPredicted RBP19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 EMC10Q5UCC4 262 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 EGFLAMQ63HQ2 1017 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 SERPINA13PQ6UXR4 307 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 CAMK1DQ8IU85 385 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 SLC25A41Q8N5S1 370 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 SH3GL2Q99962 352 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 CHKBQ9Y259 395 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 TEX264Q9Y6I9 313 aa19.08■□□□□ 0.64
PDLIM3-202ENST00000284770 EDDM13A0A1B0GTR0 161 aa19.07■□□□□ 0.64
PDLIM3-202ENST00000284770 ANTXRLA6NF34 631 aa19.07■□□□□ 0.64
PDLIM3-202ENST00000284770 TRAFD1O14545 582 aaPredicted RBP19.07■□□□□ 0.64
PDLIM3-202ENST00000284770 FZD6O60353 706 aa19.07■□□□□ 0.64
PDLIM3-202ENST00000284770 SOCS5O75159 536 aa19.07■□□□□ 0.64
PDLIM3-202ENST00000284770 ACSL3O95573 720 aa19.07■□□□□ 0.64
PDLIM3-202ENST00000284770 NDST3O95803 873 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms