RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PAAF1Q9BRP4 392 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 GATA5Q9BWX5 397 aaPredicted RBP14.47□□□□□ -0.09
TMEM47-201ENST00000275954 RHOJQ9H4E5 214 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 WDR41Q9HAD4 459 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 RIC8BQ9NVN3 520 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 PKD2L2Q9NZM6 624 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 ZMYM5Q9UJ78 669 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 BTRCQ9Y297 605 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 TUBGCP6Q96RT7 1819 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 NEMP2A6NFY4 417 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 MGRN1O60291 552 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 BEST1O76090 585 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 GJA1P17302 382 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 CXCR3P49682 368 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 DSC2Q02487 901 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 GRIK3Q13003 919 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 PTPRNQ16849 979 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 INTS6LQ5JSJ4 861 aaKnown RBP14.47□□□□□ -0.09
TMEM47-201ENST00000275954 ANKS6Q68DC2 871 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 SLC24A5Q71RS6 500 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 MON1AQ86VX9 555 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 TP53INP2Q8IXH6 220 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 FIBCD1Q8N539 461 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 C17orf80Q9BSJ5 609 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 PSAT1Q9Y617 370 aa14.47□□□□□ -0.09
TMEM47-201ENST00000275954 ARVCFO00192 962 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 BIRC5O15392 142 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 FGBP02675 491 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 SEMA5AQ13591 1074 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 KRT33BQ14525 404 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 KCNJ11Q14654 390 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 ZNF781Q8N8C0 355 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 OR6Y1Q8NGX8 325 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 FAR2Q96K12 515 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 HCSTQ9UBK5 93 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 MYH4Q9Y623 1939 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 INPP4BO15327 924 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 MLNP12872 115 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 INCA1Q0VD86 236 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 FAM187BQ17R55 369 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 POM121L1PQ3SYA9 428 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 PKN3Q6P5Z2 889 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 ZBTB49Q6ZSB9 765 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 CDHR3Q6ZTQ4 885 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 ZNF786Q8N393 782 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 RNF217Q8TC41 542 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 TBATAQ96M53 351 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 ADGRE3Q9BY15 652 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 PNMA8BQ9ULN7 279 aaPredicted RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 NENFQ9UMX5 172 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 TTC28Q96AY4 2481 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 TTC36A6NLP5 189 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 PSMD12O00232 456 aaPredicted RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 CLASP2O75122 1294 aaKnown RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 LTA4HP09960 611 aaKnown RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 NAB1Q13506 487 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 RALGPS1Q5JS13 557 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 METTL6Q8TCB7 284 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 SH3KBP1Q96B97 665 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 NMD3Q96D46 503 aaKnown RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 RCOR3Q9P2K3 495 aaPredicted RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 SEPT3Q9UH03 358 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 FBXW11Q9UKB1 542 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 SLC12A4Q9UP95 1085 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 FARP1Q9Y4F1 1045 aaPredicted RBP14.46□□□□□ -0.09
TMEM47-201ENST00000275954 AK5Q9Y6K8 562 aa14.46□□□□□ -0.09
TMEM47-201ENST00000275954 SYCE1LA8MT33 242 aa14.46□□□□□ -0.1
TMEM47-201ENST00000275954 F2P00734 622 aa14.46□□□□□ -0.1
TMEM47-201ENST00000275954 ATP5F1P24539 256 aaPredicted RBP14.46□□□□□ -0.1
TMEM47-201ENST00000275954 MAP4P27816 1152 aaKnown RBP14.46□□□□□ -0.1
TMEM47-201ENST00000275954 CDH5P33151 784 aaPredicted RBP14.46□□□□□ -0.1
TMEM47-201ENST00000275954 BHLHE22Q8NFJ8 381 aaPredicted RBP14.46□□□□□ -0.1
TMEM47-201ENST00000275954 IGKV6-21A0A0C4DH24 114 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 ITM2AO43736 263 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 CCNT2O60583 730 aaKnown RBP14.45□□□□□ -0.1
TMEM47-201ENST00000275954 SIN3BO75182 1162 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 CKBP12277 381 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 ZNF23P17027 643 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 CLDN10P78369 228 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 ELAVL2Q12926 359 aaKnown RBP14.45□□□□□ -0.1
TMEM47-201ENST00000275954 OTUD3Q5T2D3 398 aaPredicted RBP14.45□□□□□ -0.1
TMEM47-201ENST00000275954 YAF2Q8IY57 180 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 FNDC5Q8NAU1 212 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 TXLNGYQ9BZA5 131 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 PGAP2Q9UHJ9 254 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 CROTQ9UKG9 612 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 VWA7Q9Y334 891 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 ATXN2Q99700 1313 aaKnown RBP14.45□□□□□ -0.1
TMEM47-201ENST00000275954 EP300Q09472 2414 aaPredicted RBP14.45□□□□□ -0.1
TMEM47-201ENST00000275954 MYO1GB0I1T2 1018 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 FKBP9O95302 570 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 CXCL14O95715 111 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 IRF9Q00978 393 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 LIPMQ5VYY2 423 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 FKBP9P1Q75LS8 142 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 CAND1Q86VP6 1230 aaKnown RBP14.45□□□□□ -0.1
TMEM47-201ENST00000275954 SLC22A9Q8IVM8 553 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 ING5Q8WYH8 240 aa14.45□□□□□ -0.1
TMEM47-201ENST00000275954 MOCOSQ96EN8 888 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms