RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 VNN1O95497 513 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TP53P04637 393 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 CRHR1P34998 444 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 DDOSTP39656 456 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 CLK1P49759 484 aaKnown RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 FMO1Q01740 532 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 MFSD13AQ14CX5 517 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 MAPRE2Q15555 327 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 BROXQ5VW32 411 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TMEM236Q5W0B7 351 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 CYP2R1Q6VVX0 501 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ANKRD13AQ8IZ07 590 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SFRP1Q8N474 314 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TAB3Q8N5C8 712 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 PACRGLQ8N7B6 248 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 OR7D4Q8NG98 312 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 RP9Q8TA86 221 aaKnown RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 NDNFQ8TB73 568 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SEPT8Q92599 483 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 MBOAT7Q96N66 472 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TMEM117Q9H0C3 514 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 FAM96AQ9H5X1 160 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SOX17Q9H6I2 414 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 BCAS3Q9H6U6 928 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SPC25Q9HBM1 224 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SYBUQ9NX95 663 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 GLTPQ9NZD2 209 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 IP6K2Q9UHH9 426 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 RAD54BQ9Y620 910 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 PTPRFP10586 1907 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 RNF103-CHMP3A0A140T963 221 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 M0R3G1 203 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TRIM38O00635 465 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 EXTL3O43909 919 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 CPNE3O75131 537 aaKnown RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF780AO75290 641 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 PRKD3O94806 890 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TRIM16O95361 564 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 AMHP03971 560 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ELK4P28324 431 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ELK3P41970 407 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ARCN1P48444 511 aaKnown RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ARPP19P56211 112 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ART3Q13508 389 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 DGUOKQ16854 277 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF181Q2M3W8 571 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 C2CD6Q53TS8 623 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 INTS11Q5TA45 600 aaKnown RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ATF7IP2Q5U623 682 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 NXNL2Q5VZ03 156 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 DRICH1Q6PGQ1 229 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 PAGE2Q7Z2X7 111 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 FAM83AQ86UY5 434 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SLC47A2Q86VL8 602 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF677Q86XU0 584 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 PPIL6Q8IXY8 311 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 UBQLNLQ8IYU4 475 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 METTL4Q8N3J2 472 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 PPM1NQ8N819 430 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 NAT16Q8N8M0 369 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 FAM83FQ8NEG4 500 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 TAS1R2Q8TE23 839 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 HSFY1Q96LI6 401 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 OR52B2Q96RD2 323 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 KCTD14Q9BQ13 255 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 DCP1AQ9NPI6 582 aaPredicted RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SLC35C2Q9NQQ7 365 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 EIF3KQ9UBQ5 218 aaKnown RBP9.3□□□□□ -0.92
PDGFC-201ENST00000274071 SNX7Q9UNH6 387 aa9.3□□□□□ -0.92
PDGFC-201ENST00000274071 KAT6AQ92794 2004 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TCRBV3S1A0A5B6 114 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CXorf49A8MYA2 514 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-201ENST00000274071 KBTBD13C9JR72 458 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 SGK1O00141 431 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 PAPSS1O43252 624 aaPredicted RBP9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TGFB1I1O43294 461 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 FGF18O76093 207 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CDK14O94921 469 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 VAPBO95292 243 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 SEC24AO95486 1093 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 P4HBP07237 508 aaKnown RBP9.29□□□□□ -0.92
PDGFC-201ENST00000274071 YES1P07947 543 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 KRT7P08729 469 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CYP2A7P20853 494 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CD9P21926 228 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 GLDCP23378 1020 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 NAPAP54920 295 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 TAS2R40P59535 323 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 PTP4A2Q12974 167 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ADPRMQ3LIE5 342 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CRY2Q49AN0 593 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CYBRD1Q53TN4 286 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 CORO6Q6QEF8 472 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 EPGNQ6UW88 154 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ARSKQ6UWY0 536 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 PLEKHM3Q6ZWE6 761 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 ADCK1Q86TW2 530 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 NOXA1Q86UR1 476 aa9.29□□□□□ -0.92
PDGFC-201ENST00000274071 AMIGO1Q86WK6 493 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms