RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MIPP30301 263 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ARHGDIBP52566 201 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 AP3S2P59780 193 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FAM182BQ5T319 152 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FAM20CQ8IXL6 584 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TBC1D21Q8IYX1 336 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TCAIMQ8N3R3 496 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 DEFB129Q9H1M3 183 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ALG9Q9H6U8 611 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 AASDHPPTQ9NRN7 309 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ZSCAN5CA6NGD5 496 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TRAFD1O14545 582 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 LIASO43766 372 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 LRIG2O94898 1065 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ANXA5P08758 320 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 AIF1P55008 147 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 DGCR6Q14129 220 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 HKDC1Q2TB90 917 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TNFAIP8L3Q5GJ75 292 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PSTKQ8IV42 348 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 LGI2Q8N0V4 545 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 HELQQ8TDG4 1101 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 C2orf49Q9BVC5 232 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TMEM138Q9NPI0 162 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 DDX43Q9NXZ2 648 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 RAP2CQ9Y3L5 183 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 IFT172Q9UG01 1749 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TRUB2O95900 331 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CYP3A4P08684 503 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 GSSP48637 474 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PKNOX1P55347 436 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 RAB10P61026 200 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PPP1R15BQ5SWA1 713 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 EPB41L1Q9H4G0 881 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 A0A1W2PRG6 482 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 SUV39H1O43463 412 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 TNNI3P19429 210 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 SLC12A3P55017 1021 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 MAGEE2Q8TD90 523 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 LRRC19Q9H756 370 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ABCC13Q9NSE7 274 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 INTS7Q9NVH2 962 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 IQCMA0A1B0GVH7 501 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ACKR2O00590 384 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 RGL2O15211 777 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FOXR2Q6PJQ5 311 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 MNTQ99583 582 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FKBP14Q9NWM8 211 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 COG5Q9UP83 839 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 CHD2O14647 1828 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FAM205AQ6ZU69 1335 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 ZDHHC20Q5W0Z9 365 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 PTCD2Q8WV60 388 aaKnown RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
LIMD1-201ENST00000273317 FNDC11Q9BVV2 318 aa8.04□□□□□ -1.12
LIMD1-201ENST00000273317 YBX3P16989 372 aaKnown RBP eCLIP8.03□□□□□ -1.121e-7■□□□□ 8.1
LIMD1-201ENST00000273317 IDH2P48735 452 aaKnown RBP8.03□□□□□ -1.12
LIMD1-201ENST00000273317 CCR4P51679 360 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 SRP54P61011 504 aaKnown RBP8.03□□□□□ -1.12
LIMD1-201ENST00000273317 BCL2L1Q07817 233 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF554Q86TJ5 538 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 PSMA8Q8TAA3 256 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 SLC35C1Q96A29 364 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 VPS35Q96QK1 796 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 TRMOQ9BU70 441 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 MPZL2O60487 215 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 TSPAN9O75954 239 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 HLA-DQA2P01906 255 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ZNF37AP17032 561 aaPredicted RBP8.03□□□□□ -1.12
LIMD1-201ENST00000273317 CYP2B6P20813 491 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 GLRA2P23416 452 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 PRDX6P30041 224 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 GRIA4P48058 902 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 AKR1D1P51857 326 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 BHMTQ93088 406 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 AGXT2Q9BYV1 514 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 SMURF2Q9HAU4 748 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 TMCC2O75069 709 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 FTH1P02794 183 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ARP10275 920 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 STXBP5Q5T5C0 1151 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ATP13A3Q9H7F0 1226 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 LPIN1Q14693 890 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 SMYD1Q8NB12 490 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 WNT8BQ93098 351 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 RBM4BQ9BQ04 359 aaKnown RBP8.03□□□□□ -1.12
LIMD1-201ENST00000273317 RBM4Q9BWF3 364 aaKnown RBP8.03□□□□□ -1.12
LIMD1-201ENST00000273317 TMEM134Q9H6X4 195 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 TDRKHQ9Y2W6 561 aaKnown RBP8.03□□□□□ -1.12
LIMD1-201ENST00000273317 PCDHGB3Q9Y5G1 929 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ULK1O75385 1050 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 NUDT14O95848 222 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 FGFR1P11362 822 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 CDC25CP30307 473 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 FOLH1Q04609 750 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ENPEPQ07075 957 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 NRF1Q16656 503 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 ARHGAP36Q6ZRI8 547 aa8.03□□□□□ -1.12
LIMD1-201ENST00000273317 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms