RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 RAD54BQ9Y620 910 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 PLIN3O60664 434 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 ATG7O95352 703 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 GUCA1CO95843 209 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 ERBB2P04626 1255 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 YBX3P16989 372 aaKnown RBP eCLIP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 TFEBP19484 476 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 NPY2RP49146 381 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 ARHGAP36Q6ZRI8 547 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 HS6ST3Q8IZP7 471 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 ACMSDQ8TDX5 336 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 WWOXQ9NZC7 414 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 EFR3BQ9Y2G0 817 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 MYH6P13533 1939 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 NADKO95544 446 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 NFKB1P19838 968 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 NR2C2P49116 596 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 GPX6P59796 221 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 CCDC149Q6ZUS6 474 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 DCP1BQ8IZD4 617 aaKnown RBP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 ZNF276Q8N554 614 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 ITPKCQ96DU7 683 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 GATA5Q9BWX5 397 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 WRAP73Q9P2S5 460 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-201ENST00000269571 MKL2Q9ULH7 1088 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 U3KQV3 271 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
ERBB2-201ENST00000269571 PLA2G6O60733 806 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 RNASEH1O60930 286 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 CPSF4O95639 269 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ASS1P00966 412 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 FYNP06241 537 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 XRCC1P18887 633 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 IL12AP29459 219 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 HADHBP55084 474 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 PRKD1Q15139 912 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SPANXN2Q5MJ10 180 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 BROXQ5VW32 411 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ADCK2Q7Z695 626 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 AHI1Q8N157 1196 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 PLD5Q8N7P1 536 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 AAASQ9NRG9 546 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SNX8Q9Y5X2 465 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 A0A1W2PQ72 361 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 TK2O00142 265 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 TSHRP16473 764 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ZNF37AP17032 561 aaPredicted RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 GRIA1P42261 906 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SULT2A1Q06520 285 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 FBXO48Q5FWF7 155 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 FBXO39Q8N4B4 442 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SAMD3Q8N6K7 520 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 OR52K2Q8NGK3 314 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 MIPEPQ99797 713 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 HEPHQ9BQS7 1158 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ZMYM5Q9UJ78 669 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ZNF510Q9Y2H8 683 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 TCEA3O75764 348 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 HGFP14210 728 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 HK2P52789 917 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 EEF1DP3Q658K8 133 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 PSTKQ8IV42 348 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SLC7A5P1Q8MH63 180 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 METTL6Q8TCB7 284 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 TFAP2BQ92481 460 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SEPT8Q92599 483 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 IRF2BPLQ9H1B7 796 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 AASDHPPTQ9NRN7 309 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 GNPTGQ9UJJ9 305 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 EIF3LQ9Y262 564 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 MAGEB16A2A368 324 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ACKR2O00590 384 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 CCNT2O60583 730 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SH3BGRLO75368 114 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 ALDH4A1P30038 563 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 HARS2P49590 506 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 RGS4P49798 205 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 THOP1P52888 689 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 EFEMP1Q12805 493 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 TRAF3Q13114 568 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 LSM12Q3MHD2 195 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SH3PXD2AQ5TCZ1 1133 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 LIPMQ5VYY2 423 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 XKR5Q6UX68 686 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SLC22A9Q8IVM8 553 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 STX19Q8N4C7 294 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 NAT16Q8N8M0 369 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 GRPEL2Q8TAA5 225 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 SEC14L1Q92503 715 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 CDCA5Q96FF9 252 aa12.18□□□□□ -0.46
ERBB2-201ENST00000269571 APOBEC3GQ9HC16 384 aaKnown RBP12.18□□□□□ -0.46
ERBB2-201ENST00000269571 PNMA8CA0A1B0GUJ8 204 aa12.17□□□□□ -0.46
ERBB2-201ENST00000269571 B4GALT5O43286 388 aa12.17□□□□□ -0.46
ERBB2-201ENST00000269571 MTA2O94776 668 aa12.17□□□□□ -0.46
ERBB2-201ENST00000269571 F9P00740 461 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms