RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 CTC1Q2NKJ3 1217 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 FUT11Q495W5 492 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 CES5AQ6NT32 575 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 UNC5BQ8IZJ1 945 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 MZB1Q8WU39 189 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 E2F7Q96AV8 911 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 ISG20Q96AZ6 181 aaKnown RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 EXOC2Q96KP1 924 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 CDH22Q9UJ99 828 aa14.25□□□□□ -0.13
SS18-201ENST00000269137 FCF1Q9Y324 198 aaKnown RBP14.25□□□□□ -0.13
SS18-201ENST00000269137 IQANK1A0A1B0GTG1 560 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 A6NNZ2 444 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 HEPACAM2A8MVW5 462 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 K7ERQ8 282 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 SMAD6O43541 496 aaKnown RBP14.24□□□□□ -0.13
SS18-201ENST00000269137 PAPSS2O95340 614 aaPredicted RBP14.24□□□□□ -0.13
SS18-201ENST00000269137 KRT15P19012 456 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 FCARP24071 287 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 MAPK8P45983 427 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 SERPINB9P50453 376 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 LAMB3Q13751 1172 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 LRIT3Q3SXY7 679 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 TUBB8Q3ZCM7 444 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 LGSNQ5TDP6 509 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 NLRP9Q7RTR0 991 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 SRLQ86TD4 932 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 TDRD1Q9BXT4 1180 aaKnown RBP14.24□□□□□ -0.13
SS18-201ENST00000269137 PPANQ9NQ55 473 aaKnown RBP14.24□□□□□ -0.13
SS18-201ENST00000269137 TREX1Q9NSU2 369 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 RAI2Q9Y5P3 530 aa14.24□□□□□ -0.13
SS18-201ENST00000269137 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 MROH6A6NGR9 719 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 FAM155BO75949 473 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 KRT37O76014 449 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 NFATC1O95644 943 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 PRLP01236 227 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ADH5P11766 374 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 POU3F3P20264 500 aaPredicted RBP14.23□□□□□ -0.13
SS18-201ENST00000269137 RGS19P49795 217 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ATP1A2P50993 1020 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 PDGFRLQ15198 375 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ADIPOR2Q86V24 386 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 SRRM1Q8IYB3 904 aaKnown RBP14.23□□□□□ -0.13
SS18-201ENST00000269137 PEX13Q92968 403 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ATP2A3Q93084 1043 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 FAM83CQ9BQN1 747 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ZFP14Q9HCL3 533 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 THG1LQ9NWX6 298 aaKnown RBP14.23□□□□□ -0.13
SS18-201ENST00000269137 PSD3Q9NYI0 1048 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 ANKRD36A6QL64 1941 aa14.23□□□□□ -0.13
SS18-201ENST00000269137 MYLKQ15746 1914 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 UGT1A9O60656 530 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ZNF821O75541 412 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 KRT38O76015 456 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 SNRPAP09012 282 aaKnown RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 CISD3P0C7P0 127 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 SRCP12931 536 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CA4P22748 312 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CNTFP26441 200 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 COL19A1Q14993 1142 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 PDPK2PQ6A1A2 396 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 KIAA0930Q6ICG6 404 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 RNF135Q8IUD6 432 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 AHI1Q8N157 1196 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 MTBPQ96DY7 904 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 RIPOR3Q96MK2 946 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CEP44Q9C0F1 390 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 TRABDQ9H4I3 376 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 UGT1A7Q9HAW7 530 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 UGT1A10Q9HAW8 530 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 UGT1A8Q9HAW9 530 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ZFATQ9P243 1243 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 SLC25A13Q9UJS0 675 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 RIMKLBQ9ULI2 386 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CHKBQ9Y259 395 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 REV3LO60673 3130 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 BRWD1Q9NSI6 2320 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 KIF26AQ9ULI4 1882 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 FOXO6A8MYZ6 492 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 TBX10O75333 385 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 BRAFP15056 766 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CREB1P16220 341 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 PAMP19021 973 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 CTSOP43234 321 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 ARCN1P48444 511 aaKnown RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 VASPP50552 380 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 ECT2LQ008S8 904 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 FCHO2Q0JRZ9 810 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 TRAF2Q12933 501 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 DGKKQ5KSL6 1271 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 ATXN7L2Q5T6C5 722 aaPredicted RBP14.22□□□□□ -0.13
SS18-201ENST00000269137 TSTD2Q5T7W7 516 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 TEDDM1Q5T9Z0 273 aa14.22□□□□□ -0.13
SS18-201ENST00000269137 TRIM68Q6AZZ1 485 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms