RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PRORSD1PA6NEY8 169 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 CABYRO75952 493 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 TOMM70O94826 608 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 HLA-DQB2P05538 268 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 ATP5BP06576 529 aaKnown RBP9.21□□□□□ -0.93
MSH4-201ENST00000263187 KCNC1P48547 511 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 COG7P83436 770 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 FASTKQ14296 549 aaKnown RBP9.21□□□□□ -0.93
MSH4-201ENST00000263187 CAPRIN1Q14444 709 aaKnown RBP9.21□□□□□ -0.93
MSH4-201ENST00000263187 PKN3Q6P5Z2 889 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 GPR142Q7Z601 462 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.93
MSH4-201ENST00000263187 ZFAND2BQ8WV99 257 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 EZH1Q92800 747 aaPredicted RBP9.21□□□□□ -0.93
MSH4-201ENST00000263187 VTA1Q9NP79 307 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 ARHGEF38Q9NXL2 777 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 GTF2IRD1Q9UHL9 959 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.93
MSH4-201ENST00000263187 BTBD19C9JJ37 291 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 B3GAT3O94766 335 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 SIX3O95343 332 aaPredicted RBP9.21□□□□□ -0.94
MSH4-201ENST00000263187 NPY2RP49146 381 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 USP46P62068 366 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 GALNT2Q10471 571 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 PPIL2Q13356 520 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 LSAMPQ13449 338 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 CCL14Q16627 93 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 FAM83EQ2M2I3 478 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 KIF19Q2TAC6 998 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 GPR158Q5T848 1215 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 SCIMPQ6UWF3 145 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 ARHGAP22Q7Z5H3 698 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 ARHGAP18Q8N392 663 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 DCBLD1Q8N8Z6 715 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 MYLPFQ96A32 169 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 MAML3Q96JK9 1138 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 TINF2Q9BSI4 451 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 KATNBL1Q9H079 304 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 NT5MQ9NPB1 228 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 IRAK4Q9NWZ3 460 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 NCKIPSDQ9NZQ3 722 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 C6orf203Q9P0P8 240 aaPredicted RBP9.21□□□□□ -0.94
MSH4-201ENST00000263187 FBXO5Q9UKT4 447 aa9.21□□□□□ -0.94
MSH4-201ENST00000263187 CCL15-CCL14A0A0B4J2E2 113 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 AKAP10O43572 662 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 HMBSP08397 361 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PRSS56P0CW18 603 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 MAPK10P53779 464 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 SULT2A1Q06520 285 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 NSUN2Q08J23 767 aaKnown RBP eCLIP9.2□□□□□ -0.94
MSH4-201ENST00000263187 SEMA3BQ13214 749 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 MFSD10Q14728 455 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CCL15Q16663 113 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 MGAT5BQ3V5L5 792 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 METTL21CQ5VZV1 264 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 NEPROQ6NW34 567 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 C14orf80Q86SX3 495 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 SCN4BQ8IWT1 228 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PGAM4Q8N0Y7 254 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 TRIML2Q8N7C3 387 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PPHLN1Q8NEY8 458 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 HMGCLL1Q8TB92 370 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 DQX1Q8TE96 717 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 ABTB1Q969K4 478 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 PRICKLE1Q96MT3 831 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 GPR78Q96P69 363 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 KCNA7Q96RP8 456 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 TMEM79Q9BSE2 394 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 MRPL46Q9H2W6 279 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 DERAQ9Y315 318 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 AP4S1Q9Y587 144 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PSMD12O00232 456 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 FBP2O00757 339 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CASQ2O14958 399 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 UBDO15205 165 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PAGE1O75459 146 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 FAM58BPP0C7Q3 252 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CPB1P15086 417 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PNPLA4P41247 253 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 GRIA3P42263 894 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 RPL5P46777 297 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 SLC7A2P52569 658 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CSE1LP55060 971 aaKnown RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 PLIN5Q00G26 463 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PLOD1Q02809 727 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 GRM2Q14416 872 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 DBN1Q16643 649 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 TIGD5Q53EQ6 642 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PCID2Q5JVF3 399 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 BTBD8Q5XKL5 378 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CUZD1Q86UP6 607 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 CIR1Q86X95 450 aaPredicted RBP9.2□□□□□ -0.94
MSH4-201ENST00000263187 CPNE9Q8IYJ1 553 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 HDAC11Q96DB2 347 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 C3orf30Q96M34 536 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 Q9H521 79 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 PREBQ9HCU5 417 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 KCNH4Q9UQ05 1017 aa9.2□□□□□ -0.94
MSH4-201ENST00000263187 BTRCQ9Y297 605 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms