RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 GDI2P50395 445 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 GTF2A2P52657 109 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 YWHAHQ04917 246 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 DBPQ10586 325 aaPredicted RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 RAB43Q86YS6 212 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 FAM109AQ8N4B1 249 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 APBA2Q99767 749 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CACYBPQ9HB71 228 aaKnown RBP13.1□□□□□ -0.31
TMEM260-201ENST00000261556 IL17RBQ9NRM6 502 aa13.1□□□□□ -0.31
TMEM260-201ENST00000261556 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 FGFR1P11362 822 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ATP6V1B2P21281 511 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 KCNA5P22460 613 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 SREBF1P36956 1147 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 DAGLBQ8NCG7 672 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 OR6P1Q8NGX9 317 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 CYP2W1Q8TAV3 490 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 CLEC4MQ9H2X3 399 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 IFT80Q9P2H3 777 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 KANSL3Q9P2N6 904 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 CPA4Q9UI42 421 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 RGSL1A5PLK6 1076 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 MSI1O43347 362 aaKnown RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 XYLBO75191 536 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 AVILO75366 819 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 GRIK1P39086 918 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 KCNT1Q5JUK3 1230 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 FBXO16Q8IX29 292 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 TNS4Q8IZW8 715 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ATP6V0D2Q8N8Y2 350 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 NCLNQ969V3 563 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ACSS3Q9H6R3 686 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 RIOX1Q9H6W3 641 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 HTRA2O43464 458 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 NPPAP01160 153 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 HK2P52789 917 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 POU5F1BQ06416 359 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 STX5Q13190 355 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 SKIV2LQ15477 1246 aaKnown RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 PITRM1Q5JRX3 1037 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 SH3BP5LQ7L8J4 393 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 BBS7Q8IWZ6 715 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 SPARTQ8N0X7 666 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ENKURQ8TC29 256 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ZFP90Q8TF47 636 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 SLC35C1Q96A29 364 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
TMEM260-201ENST00000261556 RIBC2Q9H4K1 309 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 CYP26B1Q9NR63 512 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
TMEM260-201ENST00000261556 ANGPT2O15123 496 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 TYROBPO43914 113 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 RRM2P31350 389 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 NNMTP40261 264 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 GLRBP48167 497 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 KPNA2P52292 529 aaKnown RBP13.08□□□□□ -0.31
TMEM260-201ENST00000261556 MARSP56192 900 aaKnown RBP13.08□□□□□ -0.31
TMEM260-201ENST00000261556 PIGFQ07326 219 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 KLHL12Q53G59 568 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.31
TMEM260-201ENST00000261556 KAT5Q92993 513 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 NARS2Q96I59 477 aaKnown RBP13.08□□□□□ -0.31
TMEM260-201ENST00000261556 RNF145Q96MT1 663 aa13.08□□□□□ -0.31
TMEM260-201ENST00000261556 PRPF19Q9UMS4 504 aaKnown RBP13.08□□□□□ -0.31
TMEM260-201ENST00000261556 MYH1P12882 1939 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 TRIM38O00635 465 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 FSCN2O14926 492 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
TMEM260-201ENST00000261556 FAM205BPQ63HN1 556 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 RNF135Q8IUD6 432 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 SPATA2LQ8IUW3 424 aaPredicted RBP13.08□□□□□ -0.32
TMEM260-201ENST00000261556 GALNT11Q8NCW6 608 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 RTKNQ9BST9 563 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 SCN3BQ9NY72 215 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 SHOC2Q9UQ13 582 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 SLC30A1Q9Y6M5 507 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 NCAM1P13591 858 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 DPY19L3Q6ZPD9 716 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 C7orf26Q96N11 449 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 NT5C1AQ9BXI3 368 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 MAP3K20Q9NYL2 800 aaKnown RBP13.08□□□□□ -0.32
TMEM260-201ENST00000261556 KLK14Q9P0G3 267 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 AJAP1Q9UKB5 411 aaPredicted RBP13.08□□□□□ -0.32
TMEM260-201ENST00000261556 FZD1Q9UP38 647 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 RAB19A4D1S5 217 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 ALOX15BO15296 676 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 CSDE1O75534 798 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms