RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CKMT1AP12532 417 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 NME1P15531 152 aaKnown RBP19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 PFN3P60673 137 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 EIF2B5Q13144 721 aaKnown RBP19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 ASIC2Q16515 512 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 ZNF571Q7Z3V5 609 aaPredicted RBP19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 ARFGAP1Q8N6T3 406 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 RFFLQ8WZ73 363 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 CENPTQ96BT3 561 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 ARHGEF26Q96DR7 871 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 VCPIP1Q96JH7 1222 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 PEBP4Q96S96 227 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 PARVAQ9NVD7 372 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 UBA2Q9UBT2 640 aaPredicted RBP19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 AP4E1Q9UPM8 1137 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 BPTFQ12830 3046 aa19.24■□□□□ 0.67
TM6SF1-201ENST00000258909 LY6G6EA0A0G2JKS1 128 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 FGF10O15520 208 aaPredicted RBP19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 MT-CO3P00414 261 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 JUNDP17535 347 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 DESP17661 470 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 IGFALSP35858 605 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 E2F1Q01094 437 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 PLEKHA7Q6IQ23 1121 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 ZSCAN30Q86W11 494 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 RBFAQ8N0V3 343 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 DCBLD1Q8N8Z6 715 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 LMX1AQ8TE12 382 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 CXorf40AQ8TE69 158 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 ASB12Q8WXK4 309 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 NAP1L5Q96NT1 182 aaPredicted RBP19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 NCAPGQ9BPX3 1015 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 BPIFA3Q9BQP9 254 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 SLC39A8Q9C0K1 460 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 TCEAL2Q9H3H9 227 aaPredicted RBP19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 LRRC19Q9H756 370 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 MBNL1Q9NR56 388 aaKnown RBP19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 MYO6Q9UM54 1294 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 COQ6Q9Y2Z9 468 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 MFHAS1Q9Y4C4 1052 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 U3KQA8 63 aa19.23■□□□□ 0.67
TM6SF1-201ENST00000258909 H3BM21 787 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 EEF2KO00418 725 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 TLX3O43711 291 aaPredicted RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 TM7SF2O76062 418 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 KLHL40Q2TBA0 621 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 DEFB133Q30KQ1 61 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 DENND6BQ8NEG7 585 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 KCTD15Q96SI1 283 aaPredicted RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 SNRNP25Q9BV90 132 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 NRSN2Q9GZP1 204 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 PDFQ9HBH1 243 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 SCUBE2Q9NQ36 999 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 PNMA8BQ9ULN7 279 aaPredicted RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 PCDHB1Q9Y5F3 818 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 SMG1Q96Q15 3661 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 A0A087WV48 116 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 TMEM191CA6NGB0 347 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 SMTNL1A8MU46 457 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 AQP9O43315 295 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 OPA1O60313 960 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 FTLP02792 175 aaPredicted RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 SKILP12757 684 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 XPAP23025 273 aaPredicted RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 PAPOLAP51003 745 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 THOP1P52888 689 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 C1orf61Q13536 156 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 RTP5Q14D33 572 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 FILIP1LQ4L180 1135 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 ERMARDQ5T6L9 678 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 CAVIN1Q6NZI2 390 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 CPEB1Q9BZB8 566 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 DKK3Q9UBP4 350 aa19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 CNOT8Q9UFF9 292 aaKnown RBP19.22■□□□□ 0.67
TM6SF1-201ENST00000258909 ANKRD36A6QL64 1941 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 DDX3XO00571 662 aaKnown RBP eCLIP19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 DAPK3O43293 454 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 BUB1BO60566 1050 aaPredicted RBP19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 PRAMEF11O60813 436 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 PRKCGP05129 697 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 ITPKBP27987 946 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 MIPP30301 263 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 RGRP47804 291 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 ZNF165P49910 485 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 NDST2P52849 883 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 CDKN3Q16667 212 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 PPP6R3Q5H9R7 873 aaPredicted RBP19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 CAMK1DQ8IU85 385 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 FAM181AQ8N9Y4 354 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 TP53I13Q8NBR0 393 aaPredicted RBP19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 DUSP23Q9BVJ7 150 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 SUV39H2Q9H5I1 410 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 AIPL1Q9NZN9 384 aa19.21■□□□□ 0.67
TM6SF1-201ENST00000258909 CPED1A4D0V7 1026 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 BRINP1O60477 761 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 GCATO75600 419 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 ERCC2P18074 760 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 EIF4A3P38919 411 aaKnown RBP19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 KLHL30Q0D2K2 578 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 IRF4Q15306 451 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms