RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 COG4Q9H9E3 785 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 EVLQ9UI08 416 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-201ENST00000258607 MUC3AQ02505 3323 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 AGRPO00253 132 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 NDC80O14777 642 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 GPC4O75487 556 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 KLKB1P03952 638 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 T-ENOLP0DO92 83 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 CCL5P13501 91 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 MYOGP15173 224 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 FGFR3P22607 806 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 ITGB8P26012 769 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 MLLT6P55198 1093 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-201ENST00000258607 BTKQ06187 659 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 BNIP1Q12981 228 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 ITIH4Q14624 930 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 PRKD1Q15139 912 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-201ENST00000258607 MAPRE1Q15691 268 aaKnown RBP9.18□□□□□ -0.94
CKAP2-201ENST00000258607 KIF19Q2TAC6 998 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 ICE2Q659A1 982 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 CYP2R1Q6VVX0 501 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 DNAJC14Q6Y2X3 702 aaPredicted RBP9.18□□□□□ -0.94
CKAP2-201ENST00000258607 ATP6V1E2Q96A05 226 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 ZFYVE19Q96K21 471 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 FOXP3Q9BZS1 431 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 CIPCQ9C0C6 399 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 RGS18Q9NS28 235 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.18□□□□□ -0.941e-7■■□□□ 12.5
CKAP2-201ENST00000258607 EMCNQ9ULC0 261 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 ACOT9Q9Y305 439 aa9.18□□□□□ -0.94
CKAP2-201ENST00000258607 GVINP1Q7Z2Y8 2422 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ZCWPW2A0A1B0GU75 182 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 PRPF4O43172 522 aaKnown RBP eCLIP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 COCHO43405 550 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 SUPT3HO75486 399 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TOMM70O94826 608 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TFEBP19484 476 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ZNF177Q13360 481 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 PCLAFQ15004 111 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TAZQ16635 292 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 MILR1Q7Z6M3 343 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 HPS6Q86YV9 775 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 CMTM8Q8IZV2 173 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TEX9Q8N6V9 391 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 MZB1Q8WU39 189 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 HEXDCQ8WVB3 486 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ANKRD49Q8WVL7 239 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 NSUN5Q96P11 429 aaKnown RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 C11orf84Q9BUA3 381 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 CADM1Q9BY67 442 aaKnown RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TAS2R1Q9NYW7 299 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 COPG2Q9UBF2 871 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 CLEC4EQ9ULY5 219 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 FAM159BA6NKW6 160 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 SLC38A8A6NNN8 435 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 UPK3BL1B0FP48 263 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 UPK3BL2E5RIL1 263 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ZBTB14O43829 449 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 KPNA6O60684 536 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 PRAMEF12O95522 483 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ALDH1A1P00352 501 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TACR2P21452 398 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TM4SF4P48230 202 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 OXCT1P55809 520 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 C18orf21Q32NC0 220 aaPredicted RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 FUT11Q495W5 492 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 GALNTL6Q49A17 601 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 ATP6V0D2Q8N8Y2 350 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 MRGPRX2Q96LB1 330 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 NPAS2Q99743 824 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 OLFM1Q99784 485 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 GPR63Q9BZJ6 419 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 IGFLR1Q9H665 355 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 MARCH5Q9NX47 278 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 TRPM5Q9NZQ8 1165 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 GMPR2Q9P2T1 348 aaKnown RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 HBS1LQ9Y450 684 aaKnown RBP9.17□□□□□ -0.94
CKAP2-201ENST00000258607 CPQQ9Y646 472 aa9.17□□□□□ -0.94
CKAP2-201ENST00000258607 E5RI56 91 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SPECC1L-ADORA2AF8WAN1 911 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 TM9SF1O15321 606 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 NIPSNAP2O75323 286 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RHOBTB1O94844 696 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 STAU1O95793 577 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 UBTFL6P0CB48 400 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 ZCCHC18P0CG32 403 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PBLDP30039 288 aaPredicted RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SERPINH1P50454 418 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 RHOAP61586 193 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 CDK16Q00536 496 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 ENPEPQ07075 957 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
CKAP2-201ENST00000258607 BFSP2Q13515 415 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 GRAMD1BQ3KR37 738 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 SIRPB2Q5JXA9 342 aa9.16□□□□□ -0.94
CKAP2-201ENST00000258607 MAP3K21Q5TCX8 1036 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms