RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SPEGQ15772 3267 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 NEMP1O14524 444 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 FLRT2O43155 660 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 MTA2O94776 668 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 PAK4O96013 591 aaPredicted RBP23.21■■□□□ 1.31
LSM4-201ENST00000252816 CSNK1DP48730 415 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 HNRNPDQ14103 355 aaKnown RBP23.21■■□□□ 1.31
LSM4-201ENST00000252816 SUZ12Q15022 739 aaKnown RBP23.21■■□□□ 1.31
LSM4-201ENST00000252816 TMCO4Q5TGY1 634 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 GCNT7Q6ZNI0 430 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 CAMK1DQ8IU85 385 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 KCTD6Q8NC69 237 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 PCDH19Q8TAB3 1148 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 BAHD1Q8TBE0 780 aaPredicted RBP23.21■■□□□ 1.31
LSM4-201ENST00000252816 KLHDC7BQ96G42 594 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 MRFAP1L1Q96HT8 127 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 NSMCE3Q96MG7 304 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 ZNF599Q96NL3 588 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 C1QTNF2Q9BXJ5 285 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 CALN1Q9BXU9 219 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 ERVMER34-1Q9H9K5 563 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 PCDHB9Q9Y5E1 797 aa23.21■■□□□ 1.31
LSM4-201ENST00000252816 TSPAN11A1L157 253 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 MAFKO60675 156 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 TOP3BO95985 862 aaKnown RBP23.2■■□□□ 1.3
LSM4-201ENST00000252816 SERPINB6P35237 376 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 LBRQ14739 615 aaKnown RBP23.2■■□□□ 1.3
LSM4-201ENST00000252816 GRM3Q14832 879 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 ABI3BPQ7Z7G0 1075 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 ZSWIM9Q86XI8 627 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 GATAD2AQ86YP4 633 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 RHBDD1Q8TEB9 315 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 RFFLQ8WZ73 363 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 BMFQ96LC9 184 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 PSKH2Q96QS6 385 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 KLF6Q99612 283 aaPredicted RBP23.2■■□□□ 1.3
LSM4-201ENST00000252816 SEPT3Q9UH03 358 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 INTUQ9ULD6 942 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 WASF3Q9UPY6 502 aa23.2■■□□□ 1.3
LSM4-201ENST00000252816 MFSD11O43934 449 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 MAGEC1O60732 1142 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 KRT7P08729 469 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 THEGLP0DJG4 465 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 RXRGP48443 463 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 NSUN2Q08J23 767 aaKnown RBP eCLIP23.19■■□□□ 1.3
LSM4-201ENST00000252816 FOXC1Q12948 553 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 PDK2Q15119 407 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 ANKRD20A8PQ5CZ79 823 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 NCBP2-AS2Q69YL0 99 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 RHOT2Q8IXI1 618 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 ATPAF2Q8N5M1 289 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 OR13H1Q8NG92 308 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 HCAR2Q8TDS4 363 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 SAP25Q8TEE9 199 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 RAPGEF5Q92565 580 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 FAF2Q96CS3 445 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 ZNF641Q96N77 438 aaPredicted RBP23.19■■□□□ 1.3
LSM4-201ENST00000252816 TUBGCP5Q96RT8 1024 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 ZNF670Q9BS34 389 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 HS3ST3A1Q9Y663 406 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 CEP295Q9C0D2 2601 aa23.19■■□□□ 1.3
LSM4-201ENST00000252816 CHD8Q9HCK8 2581 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 TPRP12270 2363 aaKnown RBP23.18■■□□□ 1.3
LSM4-201ENST00000252816 TTC24A2A3L6 582 aaPredicted RBP23.18■■□□□ 1.3
LSM4-201ENST00000252816 POM121BA6NF01 834 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 ARHGAP25P42331 645 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 SHC2P98077 582 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 SGCGQ13326 291 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 PAFAH1B3Q15102 231 aaKnown RBP23.18■■□□□ 1.3
LSM4-201ENST00000252816 TCEAL1Q15170 157 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 UGP2Q16851 508 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 GLRX5Q86SX6 157 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 ZSCAN30Q86W11 494 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 PGBD5Q8N414 524 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 PQLC3Q8N755 202 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 LENG8Q96PV6 779 aaPredicted RBP23.18■■□□□ 1.3
LSM4-201ENST00000252816 ATP13A3Q9H7F0 1226 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 ANGPTL2Q9UKU9 493 aa23.18■■□□□ 1.3
LSM4-201ENST00000252816 MMP20O60882 483 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 MAP3K6O95382 1288 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 EPHA8P29322 1005 aaPredicted RBP23.17■■□□□ 1.3
LSM4-201ENST00000252816 GRK6P43250 576 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 ARRB1P49407 418 aaPredicted RBP23.17■■□□□ 1.3
LSM4-201ENST00000252816 SCNN1BP51168 640 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 BNIP3Q12983 259 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 KDM7AQ6ZMT4 941 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 MAP7D3Q8IWC1 876 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 SLC22A18ASQ8N1D0 253 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 OXR1Q8N573 874 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 ASB12Q8WXK4 309 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 WRAP53Q9BUR4 548 aaKnown RBP23.17■■□□□ 1.3
LSM4-201ENST00000252816 CAAP1Q9H8G2 361 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 PCDH12Q9NPG4 1184 aa23.17■■□□□ 1.3
LSM4-201ENST00000252816 ACACBO00763 2458 aa23.16■■□□□ 1.3
LSM4-201ENST00000252816 A6NNZ2 444 aa23.16■■□□□ 1.3
LSM4-201ENST00000252816 YKT6O15498 198 aa23.16■■□□□ 1.3
LSM4-201ENST00000252816 LCA5LO95447 670 aa23.16■■□□□ 1.3
LSM4-201ENST00000252816 PRKCGP05129 697 aa23.16■■□□□ 1.3
LSM4-201ENST00000252816 CR2P20023 1033 aa23.16■■□□□ 1.3
LSM4-201ENST00000252816 SPINK2P20155 84 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms