RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ACTN2P35609 894 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 RABIFP47224 123 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 HDAC4P56524 1084 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 GEMIN4P57678 1058 aaKnown RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 EIF2B5Q13144 721 aaKnown RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 LINC01559Q495D7 138 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 ZNF805Q5CZA5 627 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 ZNF542PQ5EBM4 170 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 ZCCHC8Q6NZY4 707 aaKnown RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 IGF2-ASQ6U949 168 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 PCSK4Q6UW60 755 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 KDM7AQ6ZMT4 941 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 TMC6Q7Z403 805 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 SPACA3Q8IXA5 215 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 CCDC185Q8N715 623 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 LSM14AQ8ND56 463 aaKnown RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 OR2AP1Q8NGE2 309 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 OR6K2Q8NGY2 324 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 GPT2Q8TD30 523 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 RXFP2Q8WXD0 754 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 FCRL3Q96P31 734 aaPredicted RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 DUSP23Q9BVJ7 150 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 MAGEB5Q9BZ81 275 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 MAGEH1Q9H213 219 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 ZDHHC6Q9H6R6 413 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 ASCL3Q9NQ33 180 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 PNMA8BQ9ULN7 279 aaPredicted RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 ITM2BQ9Y287 266 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 SIK3Q9Y2K2 1263 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 UNC13CQ8NB66 2214 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 MAST4O15021 2626 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 TCRBV5S1A1TA0A578 114 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 IGLON5A6NGN9 336 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 CSO75390 466 aaKnown RBP10.46□□□□□ -0.73
VPS50-201ENST00000251739 GFPT2O94808 682 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 GJB6O95452 261 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 UGT2B4P06133 528 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 UNGP13051 313 aaPredicted RBP10.46□□□□□ -0.73
VPS50-201ENST00000251739 SDC4P31431 198 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 IGFALSP35858 605 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 LSSP48449 732 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 KLK7P49862 253 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 CDO1Q16878 200 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 HS1BP3Q53T59 392 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 CENPTQ96BT3 561 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 TBC1D31Q96DN5 1066 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 TBATAQ96M53 351 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 ZNF578Q96N58 590 aaPredicted RBP10.46□□□□□ -0.73
VPS50-201ENST00000251739 DEPDC7Q96QD5 511 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 PCDHB18PQ96TA0 734 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 C11orf70Q9BRQ4 267 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 BOCQ9BWV1 1114 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 OSBPL1AQ9BXW6 950 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 NUP62CLQ9H1M0 184 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 DACH1Q9UI36 760 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 DNAI1Q9UI46 699 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 DAAM1Q9Y4D1 1078 aa10.46□□□□□ -0.73
VPS50-201ENST00000251739 TEX51A0A1B0GUA7 166 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 EME2A4GXA9 379 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 ZSCAN5CA6NGD5 496 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 H3BM21 787 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 FPGTO14772 594 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 TPP1O14773 563 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 AQP9O43315 295 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 RAMP2O60895 175 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 POP4O95707 220 aaKnown RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 PRB1P04280 392 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 MPOP05164 745 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 PLEKP08567 350 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 TGM2P21980 687 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 RFC1P35251 1148 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 SOX5P35711 763 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 DUSP3P51452 185 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 DNA2P51530 1060 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 PCBP4P57723 403 aaKnown RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 ERVPABLB-1P60509 514 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 POLR2FP61218 127 aaKnown RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 SNRPD1P62314 119 aaKnown RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 GABREP78334 506 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 CCDC173Q0VFZ6 552 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 PDE1CQ14123 709 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 KRT31Q15323 416 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 ISXQ2M1V0 245 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 MYLK3Q32MK0 819 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 ARL13BQ3SXY8 428 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 ATXN7L2Q5T6C5 722 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 GUSBP11Q6P575 273 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 TRIM72Q6ZMU5 477 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 PHF13Q86YI8 300 aaPredicted RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 C3orf20Q8ND61 904 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 ZNF248Q8NDW4 579 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 SLC30A5Q8TAD4 765 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 ENOX1Q8TC92 643 aaKnown RBP10.45□□□□□ -0.74
VPS50-201ENST00000251739 IFI44Q8TCB0 444 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 FAM172AQ8WUF8 416 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 ARHGEF26Q96DR7 871 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 LRRC61Q9BV99 259 aa10.45□□□□□ -0.74
VPS50-201ENST00000251739 KLC2Q9H0B6 622 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms