RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SLC7A6OSQ96CW6 309 aaPredicted RBP18.65■□□□□ 0.58
HOXC11-201ENST00000243082 FEM1CQ96JP0 617 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 SORT1Q99523 831 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 MGME1Q9BQP7 344 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF334Q9HCZ1 680 aaPredicted RBP18.65■□□□□ 0.58
HOXC11-201ENST00000243082 WBP1LQ9NX94 342 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.64■□□□□ 0.58
HOXC11-201ENST00000243082 TEX28O15482 410 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 LDB2O43679 373 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 LILRB3O75022 631 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 EPOP01588 193 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 F11P03951 625 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 KRT16P08779 473 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 CD151P48509 253 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 EPHB3P54753 998 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 AQP5P55064 265 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 OXCT1P55809 520 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF177Q13360 481 aaPredicted RBP18.64■□□□□ 0.58
HOXC11-201ENST00000243082 SLC12A1Q13621 1099 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 KIAA0408Q6ZU52 694 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 SETD3Q86TU7 594 aaPredicted RBP18.64■□□□□ 0.58
HOXC11-201ENST00000243082 NSMCE3Q96MG7 304 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 TMEM237Q96Q45 408 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 SLC22A12Q96S37 553 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 LRMDAQ9H2I8 198 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 MRPL17Q9NRX2 175 aaKnown RBP18.64■□□□□ 0.58
HOXC11-201ENST00000243082 STOML2Q9UJZ1 356 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 DNAJC16Q9Y2G8 782 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 TBC1D30Q9Y2I9 924 aa18.64■□□□□ 0.58
HOXC11-201ENST00000243082 A0A1B0GVM2 712 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 TCAF2A6NFQ2 919 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 RHOCP08134 193 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 ARSDP51689 593 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 RAB10P61026 200 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 ZBTB16Q05516 673 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 ZNF789Q5FWF6 425 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 CNSTQ6PJW8 725 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 ALYREFQ86V81 257 aaKnown RBP18.64■□□□□ 0.57
HOXC11-201ENST00000243082 CENPLQ8N0S6 344 aaPredicted RBP18.64■□□□□ 0.57
HOXC11-201ENST00000243082 PIWIL2Q8TC59 973 aaKnown RBP18.64■□□□□ 0.57
HOXC11-201ENST00000243082 IFT43Q96FT9 208 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 PSKH2Q96QS6 385 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 ACE2Q9BYF1 805 aaPredicted RBP18.64■□□□□ 0.57
HOXC11-201ENST00000243082 SMPD4Q9NXE4 827 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 UBA2Q9UBT2 640 aaPredicted RBP18.64■□□□□ 0.57
HOXC11-201ENST00000243082 SEPT3Q9UH03 358 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 KCTD3Q9Y597 815 aa18.64■□□□□ 0.57
HOXC11-201ENST00000243082 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.63■□□□□ 0.57
HOXC11-201ENST00000243082 EFCAB14O75071 495 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 SERPINF2P08697 491 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 SBK3P0C264 359 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 MBL2P11226 248 aaPredicted RBP18.63■□□□□ 0.57
HOXC11-201ENST00000243082 COL6A2P12110 1019 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 HLA-DPA1P20036 260 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 RGRP47804 291 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 ABCE1P61221 599 aaKnown RBP18.63■□□□□ 0.57
HOXC11-201ENST00000243082 ZNF460Q14592 562 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 CXorf57Q6NSI4 855 aaKnown RBP18.63■□□□□ 0.57
HOXC11-201ENST00000243082 C16orf59Q7L2K0 433 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 TTC7BQ86TV6 843 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 LCA5Q86VQ0 697 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 BBS5Q8N3I7 341 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 CALML6Q8TD86 181 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 KCTD4Q8WVF5 259 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 TRIB3Q96RU7 358 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 YME1L1Q96TA2 773 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 TASP1Q9H6P5 420 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 IL21Q9HBE4 155 aa18.63■□□□□ 0.57
HOXC11-201ENST00000243082 CPSF2Q9P2I0 782 aaKnown RBP18.63■□□□□ 0.57
HOXC11-201ENST00000243082 FCHO1O14526 889 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 KIAA0355O15063 1070 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 SLC7A4O43246 635 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 FGF1P05230 155 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 SPATA31D3P0C874 917 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 STMN1P16949 149 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 DNAJB1P25685 340 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 LEPRP48357 1165 aaKnown RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 TAS2R39P59534 338 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 NAPRTQ6XQN6 538 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 SPATA31D4Q6ZUB0 917 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 PARP9Q8IXQ6 854 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 ADAMTS19Q8TE59 1207 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 INPP5DQ92835 1189 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 HDAC10Q969S8 669 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 ELMO2Q96JJ3 720 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 NMUR2Q9GZQ4 415 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 WWP1Q9H0M0 922 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 NOD2Q9HC29 1040 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 ARL8BQ9NVJ2 186 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 RUVBL2Q9Y230 463 aaKnown RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 ACOT9Q9Y305 439 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 CARNS1A5YM72 827 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 CCL22O00626 93 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 TRAFD1O14545 582 aaPredicted RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 GREM1O60565 184 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 APOA4P06727 396 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 RAG1P15918 1043 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 CRABP2P29373 138 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms