RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TBL1YQ9BQ87 522 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 MLPHQ9BV36 600 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-201ENST00000238688 KIFC1Q9BW19 673 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 FSD1LQ9BXM9 530 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 ACE2Q9BYF1 805 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-201ENST00000238688 RNF38Q9H0F5 515 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 TASP1Q9H6P5 420 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 RIMKLBQ9ULI2 386 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 TTLL3Q9Y4R7 772 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 MAD1L1Q9Y6D9 718 aa13.37□□□□□ -0.27
SLIRP-201ENST00000238688 MYOFQ9NZM1 2061 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 C2orf78A6NCI8 922 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-201ENST00000238688 KLKB1P03952 638 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 HLA-DQB2P05538 268 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 CKMP06732 381 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 RHOCP08134 193 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 PAMP19021 973 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 CA4P22748 312 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SLC6A4P31645 630 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 HPDP32754 393 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-201ENST00000238688 ADRA1AP35348 466 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 GAD2Q05329 585 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 ZNF235Q14590 738 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
SLIRP-201ENST00000238688 CRYMQ14894 314 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 MPPE1Q53F39 396 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 RANBP10Q6VN20 620 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 LEKR1Q6ZMV7 388 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 EXOC3L1Q86VI1 746 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 LMNTD2Q8IXW0 634 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SH2D3CQ8N5H7 860 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 RIN3Q8TB24 985 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SCG3Q8WXD2 468 aaKnown RBP13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 ACDQ96AP0 544 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 E2F7Q96AV8 911 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 PSKH2Q96QS6 385 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 GORASP1Q9BQQ3 440 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SMG9Q9H0W8 520 aaKnown RBP13.36□□□□□ -0.27
SLIRP-201ENST00000238688 PDFQ9HBH1 243 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 ATP13A1Q9HD20 1204 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 NDFIP2Q9NV92 336 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 MKS1Q9NXB0 559 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 OBP2AQ9NY56 170 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 NKIRAS1Q9NYS0 192 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 TBC1D14Q9P2M4 693 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 CPQQ9Y646 472 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 PIAS3Q9Y6X2 628 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
SLIRP-201ENST00000238688 POC1B-GALNT4F8VUJ3 575 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 SLC9A3R1O14745 358 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 TM9SF1O15321 606 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 GREM1O60565 184 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 ZWINTO95229 277 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 LUC7L3O95232 432 aaKnown RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 CYBBP04839 570 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 SNRPAP09012 282 aaKnown RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 CHRNB1P11230 501 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 TDGF1P13385 188 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 KRT15P19012 456 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 HLA-DPA1P20036 260 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 GCAP28676 217 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 MAGEA9P43362 315 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 MAPK8P45983 427 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 SOX9P48436 509 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 POLD2P49005 469 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 SLC20A2Q08357 652 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 NSUN2Q08J23 767 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 MGAT5Q09328 741 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 GAS6Q14393 721 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 ZNF528Q3MIS6 628 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 KBTBD12Q3ZCT8 623 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 PCID2Q5JVF3 399 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 CASC4Q6P4E1 433 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 TXNDC11Q6PKC3 985 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 IGDCC3Q8IVU1 814 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 TAB3Q8N5C8 712 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 DCAF4L2Q8NA75 395 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 UHMK1Q8TAS1 419 aaKnown RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 DCAKDQ8WVC6 231 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 FAM3CQ92520 227 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 USP13Q92995 863 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 TMA16Q96EY4 203 aaKnown RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 OXNAD1Q96HP4 312 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 FEM1CQ96JP0 617 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 PRICKLE1Q96MT3 831 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 C19orf43Q9BQ61 176 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 MGME1Q9BQP7 344 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 CHRDQ9H2X0 955 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 TRPC7Q9HCX4 862 aa13.35□□□□□ -0.27
SLIRP-201ENST00000238688 PRMT8Q9NR22 394 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 INTS9Q9NV88 658 aaKnown RBP13.35□□□□□ -0.27
SLIRP-201ENST00000238688 SPATA6Q9NWH7 488 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms