RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PBX3P40426 434 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 CD86P42081 329 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 CLCN5P51795 746 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 IHHQ14623 411 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 AAGABQ6PD74 315 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 TMC7Q7Z402 723 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 PHTF2Q8N3S3 785 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 CPSF7Q8N684 471 aaKnown RBP16.32■□□□□ 0.2
UBE3D-201ENST00000237186 TTC9BQ8N6N2 239 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 ARRDC2Q8TBH0 407 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 PSMG2Q969U7 264 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 ELMO2Q96JJ3 720 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 OR52B2Q96RD2 323 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 CCDC28BQ9BUN5 200 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 GPR62Q9BZJ7 368 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 SP110Q9HB58 689 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 SHROOM3Q8TF72 1996 aa16.32■□□□□ 0.2
UBE3D-201ENST00000237186 MTMR11A4FU01 709 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ENPP3O14638 875 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 DCXO43602 365 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 FKBP6O75344 327 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ALDH2P05091 517 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 CPB1P15086 417 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 MPSTP25325 297 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 GLRBP48167 497 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 MAPKAPK2P49137 400 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 KPNA1P52294 538 aaPredicted RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PGGT1BP53609 377 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 TAF10Q12962 218 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 SEPT6Q14141 434 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PCSK7Q16549 785 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 RASIP1Q5U651 963 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 CNSTQ6PJW8 725 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 LRRC74BQ6ZQY2 392 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 KDELC2Q7Z4H8 507 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 SLC25A41Q8N5S1 370 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 POU5F2Q8N7G0 328 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 OR13J1Q8NGT2 312 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PEX13Q92968 403 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 KLHL5Q96PQ7 755 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 RTKNQ9BST9 563 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 RETREG1Q9H6L5 497 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 MAN1C1Q9NR34 630 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ZDHHC2Q9UIJ5 367 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ANGPTL2Q9UKU9 493 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 MRPL42Q9Y6G3 142 aaKnown RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PLXNA3P51805 1871 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 RAMP2O60895 175 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 VNN2O95498 520 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 EPOP01588 193 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 SELPP16109 830 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ATP5F1P24539 256 aaPredicted RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 SLC26A3P40879 764 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 NSUN2Q08J23 767 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 SERINC3Q13530 473 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ZNF460Q14592 562 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 POLD3Q15054 466 aaPredicted RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 C5orf22Q49AR2 442 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 C1orf146Q5VVC0 180 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 RAP1GAP2Q684P5 730 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 LHX8Q68G74 356 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PIWIL4Q7Z3Z4 852 aaKnown RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ADGRG6Q86SQ4 1221 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PXYLP1Q8TE99 480 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 C2orf15Q8WU43 125 aaKnown RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 HEXDCQ8WVB3 486 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
UBE3D-201ENST00000237186 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 MFSD1Q9H3U5 465 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 IGSF5Q9NSI5 407 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 MARCH5Q9NX47 278 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 ARHGAP26Q9UNA1 814 aa16.31■□□□□ 0.2
UBE3D-201ENST00000237186 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 A0A1W2PQ45 241 aaPredicted RBP16.3■□□□□ 0.2
UBE3D-201ENST00000237186 A0A1W2PQY0 241 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 MEI4A8MW99 385 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 E9PBE3 544 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 KLHL41O60662 606 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
UBE3D-201ENST00000237186 ITGAXP20702 1163 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 SLC12A2P55011 1212 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 MAXP61244 160 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 AP2B1P63010 937 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 ACVR1Q04771 509 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 FAM83EQ2M2I3 478 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 C10orf120Q5SQS8 335 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 LRRC8DQ7L1W4 858 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 GPATCH11Q8N954 259 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 CCDC126Q96EE4 140 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 TSPAN17Q96FV3 270 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 UBXN10Q96LJ8 280 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 LENG8Q96PV6 779 aaPredicted RBP16.3■□□□□ 0.2
UBE3D-201ENST00000237186 CXorf56Q9H5V9 222 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 ZNF385DQ9H6B1 395 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 NCKIPSDQ9NZQ3 722 aa16.3■□□□□ 0.2
UBE3D-201ENST00000237186 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms