RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SVOPQ8N4V2 548 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 PCDH20Q8N6Y1 951 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 CCDC185Q8N715 623 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 BEST2Q8NFU1 509 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 DYNC2LI1Q8TCX1 351 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 RIPOR3Q96MK2 946 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 FRMD8P1Q9BZ68 369 aaPredicted RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 DPEP3Q9H4B8 488 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 SOX17Q9H6I2 414 aaPredicted RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 WDR70Q9NW82 654 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 TNFRSF10DQ9UBN6 386 aa13.14□□□□□ -0.31
MSH2-201ENST00000233146 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
MSH2-201ENST00000233146 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 PCP4L1A6NKN8 68 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 TBX1O43435 398 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 DNAJB5O75953 348 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 OR7A10O76100 309 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 ATF4P18848 351 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 AXLP30530 894 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 GRK3P35626 688 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 SPATC1Q76KD6 591 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 OR13J1Q8NGT2 312 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 SLC7A3Q8WY07 619 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 HEXIM2Q96MH2 286 aaKnown RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 TTYH2Q9BSA4 534 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 NECTIN3Q9NQS3 549 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 DCDC2Q9UHG0 476 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 SARDHQ9UL12 918 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 OAZ3Q9UMX2 235 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 LOC102724428A0A0B4J2F2 783 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 FAM149AA5PLN7 773 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 PLK4O00444 970 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 HSPA4LO95757 839 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 SIK1P57059 783 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 ACTR2P61160 394 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 TXNRD3NBQ6F5E7 133 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 PIGZQ86VD9 579 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 GALNT11Q8NCW6 608 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 CDKL2Q92772 493 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 TMEM80Q96HE8 168 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 DMRTB1Q96MA1 342 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 KCTD14Q9BQ13 255 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 SYBUQ9NX95 663 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 FBXO5Q9UKT4 447 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 BAG5Q9UL15 447 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 EI24O14681 340 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 GOT2P00505 430 aaKnown RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 CRHBPP24387 322 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 CNTFP26441 200 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 IL12AP29459 219 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 OR2B6P58173 313 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 CLVS2Q5SYC1 327 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 GTF2H4Q92759 462 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 CENPNQ96H22 339 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 CCDC120Q96HB5 630 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 IP6K2Q9UHH9 426 aa13.13□□□□□ -0.31
MSH2-201ENST00000233146 TRMT112Q9UI30 125 aaKnown RBP13.13□□□□□ -0.31
MSH2-201ENST00000233146 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 LEUTXA8MZ59 168 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 NEMP1O14524 444 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 SCO1O75880 301 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 ALDOAP04075 364 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 CYP3A7P24462 503 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 GHRHRQ02643 423 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 DPY19L1Q2PZI1 675 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 TYSND1Q2T9J0 566 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 TREML2Q5T2D2 321 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 METTL4Q8N3J2 472 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 SNAPC3Q92966 411 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 ACSF2Q96CM8 615 aaPredicted RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 SLC45A3Q96JT2 553 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 DGCR6LQ9BY27 220 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 UPF3AQ9H1J1 476 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 H0YAE9 185 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 SNAP29O95721 258 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 HTR1AP08908 422 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 FMO4P31512 558 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 DSG3P32926 999 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 GP2P55259 537 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms