RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PBX1P40424 430 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 NR1H2P55055 460 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 MAPKAPK3Q16644 382 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 HYIQ5T013 277 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 KRT77Q7Z794 578 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 POC5Q8NA72 575 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 TMEM216Q9P0N5 145 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 TGFB1I1O43294 461 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 KLRC2P26717 231 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 PACS1Q6VY07 963 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 VPS35Q96QK1 796 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 IDI2Q9BXS1 227 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 ANXA5P08758 320 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 PTPRAP18433 802 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 ITGA1P56199 1179 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 CDC42P60953 191 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 ARSHQ5FYA8 562 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 SDHAF4Q5VUM1 108 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 GPR156Q8NFN8 814 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 SNX6Q9UNH7 406 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 KPNA3O00505 521 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 SPIRE1Q08AE8 756 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 SGCGQ13326 291 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 SLC5A9Q2M3M2 681 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 ATG14Q6ZNE5 492 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 KIAA0408Q6ZU52 694 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 STK40Q8N2I9 435 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TMEM86AQ8N2M4 240 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 LPPQ93052 612 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 EXOC2Q96KP1 924 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 GINS4Q9BRT9 223 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 CDT1Q9H211 546 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 KLHL31Q9H511 634 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 BTBD3Q9Y2F9 522 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TCRBV7S2A1N4TA0A589 114 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 HDAC3O15379 428 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ERCC2P18074 760 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 RPL5P46777 297 aaKnown RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 PIK3CGP48736 1102 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 PFKPQ01813 784 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 IRF8Q02556 426 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 USP45Q70EL2 814 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TMEM139Q8IV31 216 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 NKAPQ8N5F7 415 aaKnown RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 LENG1Q96BZ8 264 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 SLC47A1Q96FL8 570 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ADAM2Q99965 735 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ZNF670Q9BS34 389 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 OSBPL6Q9BZF3 934 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 YDJCA8MPS7 323 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 MPSTP25325 297 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 CCR4P51679 360 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 PYDC2Q56P42 97 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ZNF544Q6NX49 715 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TRIM63Q969Q1 353 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 COL26A1Q96A83 441 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 MRPL45Q9BRJ2 306 aaKnown RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 VAV3Q9UKW4 847 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ALOX15BO15296 676 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TIPRLO75663 272 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TSHRP16473 764 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 IFNGR2P38484 337 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 SEMA5AQ13591 1074 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 CCNIQ14094 377 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 BBS12Q6ZW61 710 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 WDR55Q9H6Y2 383 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 GBA2Q9HCG7 927 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 R3HDM2Q9Y2K5 976 aaKnown RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 DHRS12A0PJE2 317 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ANKDD1BA6NHY2 528 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 ELAVL2Q12926 359 aaKnown RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 AFTPHQ6ULP2 937 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 UNC93AQ86WB7 457 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 MLPHQ9BV36 600 aaPredicted RBP13.47□□□□□ -0.25
NEK4-201ENST00000233027 TM6SF2Q9BZW4 377 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 PNPLA3Q9NST1 481 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 PCDHB12Q9Y5F1 795 aa13.47□□□□□ -0.25
NEK4-201ENST00000233027 FAM47E-STBD1D6RA91 191 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 KPNA6O60684 536 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 MLYCDO95822 493 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 CCNA2P20248 432 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 FSCN1Q16658 493 aaKnown RBP13.46□□□□□ -0.25
NEK4-201ENST00000233027 PRAMEF19Q5SWL8 479 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 CNSTQ6PJW8 725 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 STARD8Q92502 1023 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 TCF12Q99081 682 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 CLN6Q9NWW5 311 aa13.46□□□□□ -0.25
NEK4-201ENST00000233027 ENTPD4Q9Y227 616 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms