RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TREM1Q9NP99 234 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 NKIRAS2Q9NYR9 191 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 H2AFY2Q9P0M6 372 aaPredicted RBP8.45□□□□□ -1.06
SPARC-201ENST00000231061 SUCOQ9UBS9 1254 aaKnown RBP8.45□□□□□ -1.06
SPARC-201ENST00000231061 ZNF175Q9Y473 711 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 SNX13Q9Y5W8 968 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 A0A088AWK7 358 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 TRPC5OSA6NMA1 111 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 NDUFA2O43678 99 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 NOS1APO75052 506 aaPredicted RBP8.45□□□□□ -1.06
SPARC-201ENST00000231061 PHF2O75151 1096 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 TNFRSF21O75509 655 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 NR2C1P13056 603 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 GARSP41250 739 aaKnown RBP8.45□□□□□ -1.06
SPARC-201ENST00000231061 DPP6P42658 865 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 TNFAIP2Q03169 654 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 CYP24A1Q07973 514 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 STRN3Q13033 797 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 QPCTQ16769 361 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 KIAA1755Q5JYT7 1200 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 STRIP1Q5VSL9 837 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 PADI6Q6TGC4 694 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 GPR65Q8IYL9 337 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 CRYBG2Q8N1P7 616 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 PPM1KQ8N3J5 372 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 SPPL3Q8TCT6 385 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 UBXN10Q96LJ8 280 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 C12orf57Q99622 126 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 C17orf80Q9BSJ5 609 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 PI4K2AQ9BTU6 479 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 TIPINQ9BVW5 301 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 NARFLQ9H6Q4 476 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 COG4Q9H9E3 785 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 TM9SF3Q9HD45 589 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 VSX1Q9NZR4 365 aaPredicted RBP8.45□□□□□ -1.06
SPARC-201ENST00000231061 RPS6KA6Q9UK32 745 aa8.45□□□□□ -1.06
SPARC-201ENST00000231061 DIMT1Q9UNQ2 313 aaKnown RBP8.45□□□□□ -1.06
SPARC-201ENST00000231061 CENPBD1B2RD01 187 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SHBGP04278 402 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 HDCP19113 662 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 HOXA6P31267 233 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CAPZA1P52907 286 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 PPATQ06203 517 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 NXPE4Q6UWF7 544 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CCDC105Q8IYK2 499 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 FBXO25Q8TCJ0 367 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SLC5A5Q92911 643 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CIDECQ96AQ7 238 aaPredicted RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 GPR88Q9GZN0 384 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SLC12A6Q9UHW9 1150 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 VWA7Q9Y334 891 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 TAF1LQ8IZX4 1826 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 AFF2P51816 1311 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 RGS16O15492 202 aaPredicted RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 MITFO75030 526 aaPredicted RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 H2AFYO75367 372 aaKnown RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 CD63P08962 238 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 UBTFL6P0CB48 400 aaPredicted RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 COX5BP10606 129 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 ITGB6P18564 788 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 VAMP7P51809 220 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 PPP2R5EQ16537 467 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 FNDC3BQ53EP0 1204 aaKnown RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 SUSD1Q6UWL2 747 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 ADGRG5Q8IZF4 528 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CLEC4FQ8N1N0 589 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.44□□□□□ -1.06
SPARC-201ENST00000231061 NAT14Q8WUY8 206 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 KAT5Q92993 513 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CHMP6Q96FZ7 201 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SEC16BQ96JE7 1060 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CBWD1Q9BRT8 395 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SACM1LQ9NTJ5 587 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 FBXO28Q9NVF7 368 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 ERGIC3Q9Y282 383 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 UBE4BO95155 1302 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SYNGAP1Q96PV0 1343 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 HSBP1L1C9JCN9 74 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 NPC1O15118 1278 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 ENDOD1O94919 500 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 AHCYP23526 432 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 PITPNBP48739 271 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 AFF3P51826 1226 aaKnown RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 POLGP54098 1239 aaPredicted RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 RAD23BP54727 409 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 EIF3BP55884 814 aaKnown RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 SCAND1P57086 179 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 MAPK7Q13164 816 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SLC14A1Q13336 389 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 SLC15A2Q16348 729 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 LIN52Q52LA3 116 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 CACHD1Q5VU97 1274 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 ZBTB46Q86UZ6 589 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 FAM71DQ8N9W8 422 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 HTRA1Q92743 480 aa8.44□□□□□ -1.06
SPARC-201ENST00000231061 PRMT6Q96LA8 375 aaPredicted RBP8.44□□□□□ -1.06
SPARC-201ENST00000231061 ACTR6Q9GZN1 396 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms