RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 HCAR2Q8TDS4 363 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 GAB3Q8WWW8 586 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 OMDQ99983 421 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 HDAC8Q9BY41 377 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 SUV39H2Q9H5I1 410 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 DKK3Q9UBP4 350 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 SERGEFQ9UGK8 458 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 CYP8B1Q9UNU6 501 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 TTLL3Q9Y4R7 772 aa23.88■■□□□ 1.41
HOMER3-201ENST00000221222 IGHV1OR15-9A0A0B4J2B8 117 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 TTC24A2A3L6 582 aaPredicted RBP23.87■■□□□ 1.41
HOMER3-201ENST00000221222 PIGNO95427 931 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 TUBB4AP04350 444 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 DSC2Q02487 901 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 BCL2L1Q07817 233 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 NIPAL4Q0D2K0 466 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 CNTN1Q12860 1018 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 POM121L1PQ3SYA9 428 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 ZSCAN30Q86W11 494 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 CAMK1DQ8IU85 385 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 HDDC3Q8N4P3 179 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 RLN3Q8WXF3 142 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 SPACA7Q96KW9 195 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 KLHL32Q96NJ5 620 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 TMEM121Q9BTD3 319 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 GLOD4Q9HC38 313 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 DYRK4Q9NR20 520 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 NCKAP1Q9Y2A7 1128 aa23.87■■□□□ 1.41
HOMER3-201ENST00000221222 TSPAN11A1L157 253 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 C5orf60A6NFR6 353 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 TRAFD1O14545 582 aaPredicted RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 SLC7A4O43246 635 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 SOCS5O75159 536 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 RNASEH2AO75792 299 aaKnown RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 STK10O94804 968 aaKnown RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 ITGAVP06756 1048 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 STIP1P31948 543 aaKnown RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 CD68P34810 354 aaPredicted RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 FAM182AQ5T1J6 154 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 ERN2Q76MJ5 926 aaKnown RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 CREG2Q8IUH2 290 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 SPOCK2Q92563 424 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 ECHDC3Q96DC8 303 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 RTP4Q96DX8 246 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 IMP4Q96G21 291 aaKnown RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 SLC25A51Q9H1U9 297 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 NEUROG2Q9H2A3 272 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 SMARCAL1Q9NZC9 954 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 KLHL8Q9P2G9 620 aaPredicted RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 NCDNQ9UBB6 729 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 DRG1Q9Y295 367 aaKnown RBP23.86■■□□□ 1.41
HOMER3-201ENST00000221222 DMXL1Q9Y485 3027 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 CEP250Q9BV73 2442 aa23.86■■□□□ 1.41
HOMER3-201ENST00000221222 C16orf96A6NNT2 1141 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 KIF2AO00139 706 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 HTRA2O43464 458 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 HRO43593 1189 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 RPP40O75818 363 aaKnown RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 MMP2P08253 660 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 SERPINF2P08697 491 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 CD6P30203 668 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 CCDC15Q0P6D6 951 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 IHHQ14623 411 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 PIP5KL1Q5T9C9 394 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 AGBL4Q5VU57 503 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 PARS2Q7L3T8 475 aaKnown RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 PID1Q7Z2X4 250 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 C11orf74Q86VG3 221 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 FAM160A2Q8N612 972 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 FRMD1Q8N878 549 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 FAM71DQ8N9W8 422 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 C12orf50Q8NA57 414 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 GANCQ8TET4 914 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 TADA1Q96BN2 335 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 SPATA13Q96N96 652 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 SGK2Q9HBY8 427 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 WSB2Q9NYS7 404 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 RNF14Q9UBS8 474 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 MBD1Q9UIS9 605 aaPredicted RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 SMG5Q9UPR3 1016 aaKnown RBP23.85■■□□□ 1.41
HOMER3-201ENST00000221222 ZNF148Q9UQR1 794 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 NUMA1Q14980 2115 aa23.85■■□□□ 1.41
HOMER3-201ENST00000221222 PLK4O00444 970 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 GCATO75600 419 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 NEK3P51956 506 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 GDF10P55107 478 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 SNX1Q13596 522 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 SLC14A2Q15849 920 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 CYP1B1Q16678 543 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 ANKRD20A2Q5SQ80 823 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 ANKRD20A1Q5TYW2 823 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 ANKRD20A3Q5VUR7 823 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 BRAT1Q6PJG6 821 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.84■■□□□ 1.41
HOMER3-201ENST00000221222 SLC36A4Q6YBV0 504 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 RMDN1Q96DB5 314 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 TOE1Q96GM8 510 aaKnown RBP23.84■■□□□ 1.41
HOMER3-201ENST00000221222 AP1M1Q9BXS5 423 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 BTBD1Q9H0C5 482 aa23.84■■□□□ 1.41
HOMER3-201ENST00000221222 INVSQ9Y283 1065 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms