RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PDSS2Q86YH6 399 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 C1GALT1C1Q96EU7 318 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 PLD2O14939 933 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 CUL2Q13617 745 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 ZNF268Q14587 947 aaPredicted RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 HSPB11Q9Y547 144 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 KIAA2026Q5HYC2 2103 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 PGAM1P18669 254 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 GPC1P35052 558 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 SLC18A2Q05940 514 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 UAP1L1Q3KQV9 507 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
USP31-201ENST00000219689 C1QTNF1Q9BXJ1 281 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 GRIN2DO15399 1336 aa11.16□□□□□ -0.62
USP31-201ENST00000219689 TRDMT1O14717 391 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 SCAMP1O15126 338 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 PABPC1LQ4VXU2 614 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 METTL21CQ5VZV1 264 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 FAM91A1Q658Y4 838 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 COQ8AQ8NI60 647 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 RP9Q8TA86 221 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 ZNF431Q8TF32 576 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 ELMO3Q96BJ8 720 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 FRMD6Q96NE9 622 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 PFDN5Q99471 154 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 LNPEPQ9UIQ6 1025 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 MAU2Q9Y6X3 613 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 A0A0J9YVX5 310 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 PRG2P13727 222 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 DARSP14868 501 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 FMO3P31513 532 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 HALP42357 657 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 NUMBP49757 651 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 RAB2AP61019 212 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 MEA1Q16626 185 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 RALGPS1Q5JS13 557 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 VANGL1Q8TAA9 524 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 TRIM43Q96BQ3 446 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 PWWP2AQ96N64 755 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 RBM4BQ9BQ04 359 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 RPS6KA6Q9UK32 745 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 ABCA9Q8IUA7 1624 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 PEX11AO75192 247 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 VPS26AO75436 327 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 PGLSO95336 258 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 HKDC1Q2TB90 917 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 UBE2Q2LH0YL09 131 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 EDF1O60869 148 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 RPN2P04844 631 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 BNIP2Q12982 314 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 XKR5Q6UX68 686 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 BHLHE41Q9C0J9 482 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 CATSPERBQ9H7T0 1116 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 PPM1HQ9ULR3 514 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 IRAK3Q9Y616 596 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 STT3AP46977 705 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 ALDH9A1P49189 494 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 ZBED5Q49AG3 693 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 NODALQ96S42 347 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 A0A1W2PPM1 405 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 ENTPD1P49961 510 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 CDK9P50750 372 aaKnown RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 VPS72Q15906 364 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 TNFAIP8L1Q8WVP5 186 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 FAM167AQ96KS9 214 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 SMPD3Q9NY59 655 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 PEX16Q9Y5Y5 336 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 DENND4BO75064 1496 aaPredicted RBP11.15□□□□□ -0.62
USP31-201ENST00000219689 PGRMC2O15173 223 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 CLTCL1P53675 1640 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 TBRG1Q3YBR2 411 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 KIAA0895Q8NCT3 520 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 FICDQ9BVA6 458 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 GPATCH2LQ9NWQ4 482 aa11.15□□□□□ -0.62
USP31-201ENST00000219689 ZW10O43264 779 aa11.15□□□□□ -0.63
USP31-201ENST00000219689 ZNF3P17036 446 aa11.15□□□□□ -0.63
USP31-201ENST00000219689 CCNYL2Q5T2Q4 361 aa11.15□□□□□ -0.63
USP31-201ENST00000219689 SLC34A3Q8N130 599 aa11.15□□□□□ -0.63
USP31-201ENST00000219689 FNDC8Q8TC99 324 aa11.15□□□□□ -0.63
USP31-201ENST00000219689 DHRS1Q96LJ7 313 aa11.15□□□□□ -0.63
USP31-201ENST00000219689 A0A087X1B8 175 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 ASB14A6NK59 587 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 IFRD1O00458 451 aaPredicted RBP11.14□□□□□ -0.63
USP31-201ENST00000219689 UGT2B11O75310 529 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 TBX10O75333 385 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 ANXA9O76027 345 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 IGFBP5P24593 272 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 CXXC5Q7LFL8 322 aaKnown RBP11.14□□□□□ -0.63
USP31-201ENST00000219689 OR52K2Q8NGK3 314 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 YIPF2Q9BWQ6 316 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 TMEM168Q9H0V1 697 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 TAS2R1Q9NYW7 299 aa11.14□□□□□ -0.63
USP31-201ENST00000219689 RALGAPA1Q6GYQ0 2036 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms