RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 DLGAP3O95886 979 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 TFEBP19484 476 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 ME2P23368 584 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 GSSP48637 474 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 MEA1Q16626 185 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 FAAH2Q6GMR7 532 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 BTN2A3PQ96KV6 586 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 H0Y858 1186 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 OASLQ15646 514 aaKnown RBP19.09■□□□□ 0.65
SMPD3-201ENST00000219334 INAQ16352 499 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 CRTC3Q6UUV7 619 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 TERB1Q8NA31 727 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 PPP3R2Q96LZ3 170 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 RABGEF1Q9UJ41 708 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 E7ENQ6 273 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 DCXO43602 365 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 GALNT3Q14435 633 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 TSNQ15631 228 aaKnown RBP19.09■□□□□ 0.65
SMPD3-201ENST00000219334 C16orf46Q6P387 395 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 SVOPQ8N4V2 548 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 TMEM79Q9BSE2 394 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 KLHL1Q9NR64 748 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 NDUFA13Q9P0J0 144 aa19.09■□□□□ 0.65
SMPD3-201ENST00000219334 DDX20Q9UHI6 824 aaKnown RBP19.09■□□□□ 0.65
SMPD3-201ENST00000219334 PAGE1O75459 146 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 WBP4O75554 376 aaKnown RBP19.08■□□□□ 0.65
SMPD3-201ENST00000219334 USP2O75604 605 aaPredicted RBP19.08■□□□□ 0.65
SMPD3-201ENST00000219334 NOMO3P69849 1222 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 CYB5D1Q6P9G0 228 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 PTF1AQ7RTS3 328 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 BNIPLQ7Z465 357 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 POLNQ7Z5Q5 900 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 PHYKPLQ8IUZ5 450 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 TTLL2Q9BWV7 592 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 REEP1Q9H902 201 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 TREHO43280 583 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 LIASO43766 372 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 RECQL5O94762 991 aaPredicted RBP19.08■□□□□ 0.65
SMPD3-201ENST00000219334 SCTRP47872 440 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 RASAL3Q86YV0 1011 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 ATAD1Q8NBU5 361 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 C19orf60Q96EN9 201 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 ZNF541Q9H0D2 1346 aa19.08■□□□□ 0.65
SMPD3-201ENST00000219334 A0A1W2PQH9 124 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 FFAR3O14843 346 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 GPR42O15529 346 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 NAGLUP54802 743 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 MYO19Q96H55 970 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 MRPS26Q9BYN8 205 aaKnown RBP19.08■□□□□ 0.64
SMPD3-201ENST00000219334 PLK2Q9NYY3 685 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 PCDHGC5Q9Y5F6 944 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 SEPT4O43236 478 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 UBOX5O94941 541 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 PSRC1Q6PGN9 363 aaPredicted RBP19.08■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF75CPQ92670 426 aaPredicted RBP19.08■□□□□ 0.64
SMPD3-201ENST00000219334 IMP3Q9NV31 184 aaKnown RBP19.08■□□□□ 0.64
SMPD3-201ENST00000219334 COQ6Q9Y2Z9 468 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 CLUHO75153 1309 aa19.08■□□□□ 0.64
SMPD3-201ENST00000219334 RPL22P35268 128 aaKnown RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 CSNK2BP67870 215 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ZDHHC20Q5W0Z9 365 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 RIBC2Q9H4K1 309 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 MYL12BO14950 172 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 PIK3R1P27986 724 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 SNAP47Q5SQN1 464 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 SH3BP5LQ7L8J4 393 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ILDR1Q86SU0 546 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 C19orf18Q8NEA5 215 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ATXN2LQ8WWM7 1075 aaKnown RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 INTS7Q9NVH2 962 aaKnown RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ADGRB1O14514 1584 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 PRMT3O60678 531 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 CCNDBP1O95273 360 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 FMO1Q01740 532 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 BBS12Q6ZW61 710 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 OR52L1Q8NGH7 329 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 OR4L1Q8NH43 312 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 RIPOR3Q96MK2 946 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 NDNQ99608 321 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 SLC25A12O75746 678 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ATP6V0D1P61421 351 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 CBX2Q14781 532 aaPredicted RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ATP13A4Q4VNC1 1196 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 FAM151BQ6UXP7 276 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 POU5F2Q8N7G0 328 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 LGMNQ99538 433 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 POLR1BQ9H9Y6 1135 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 GTPBP1O00178 669 aaKnown RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 ERAL1O75616 437 aaKnown RBP19.07■□□□□ 0.64
SMPD3-201ENST00000219334 OTCP00480 354 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 SPATA31C1P0DKV0 1188 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 SLC25A52Q3SY17 297 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 GPAT3Q53EU6 434 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 OLFML2BQ68BL8 750 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 TRAF7Q6Q0C0 670 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 CFAP52Q8N1V2 620 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 CERS4Q9HA82 394 aa19.07■□□□□ 0.64
SMPD3-201ENST00000219334 H0YC42 278 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 SLC28A1O00337 649 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms