RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PRMT9Q6P2P2 845 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 NIPA1Q7RTP0 329 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 PIWIL4Q7Z3Z4 852 aaKnown RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CENPLQ8N0S6 344 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 DEFB106AQ8N104 65 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 PLD5Q8N7P1 536 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 DENND1AQ8TEH3 1009 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 COMMD8Q9NX08 183 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 FETUBQ9UGM5 382 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC45A1Q9Y2W3 748 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CASTOR2A6NHX0 329 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 EVPLLA8MZ36 301 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 TOP3BO95985 862 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CCNG1P51959 295 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 DPYSQ14117 519 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 LSM12Q3MHD2 195 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 TMEM198Q66K66 360 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 EFL1Q7Z2Z2 1120 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PHTF2Q8N3S3 785 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 FBXO30Q8TB52 745 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ITFG1Q8TB96 612 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PCDHAC1Q9H158 963 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PCDH18Q9HCL0 1135 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 DNAJC28Q9NX36 388 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 FAM8A1Q9UBU6 413 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 LY75O60449 1722 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 STX16-NPEPL1H3BU86 382 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 MED26O95402 600 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 NADKO95544 446 aaPredicted RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ITGAXP20702 1163 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ENTPD1P49961 510 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CTBP1Q13363 440 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 KRR1Q13601 381 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 NR6A1Q15406 480 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CGB2Q6NT52 195 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ATG14Q6ZNE5 492 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SZRD1Q7Z422 152 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC22A9Q8IVM8 553 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 BSNDQ8WZ55 320 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 UBAP1Q9NZ09 502 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 WRAP73Q9P2S5 460 aaPredicted RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC17A6Q9P2U8 582 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 J3QRK9 145 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 NRP2O60462 931 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 TSPAN3O60637 253 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CCNE2O96020 404 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ST13P50502 369 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PAGE2BQ5JRK9 111 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 XKR5Q6UX68 686 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ERI1Q8IV48 349 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SNX31Q8N9S9 440 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 FBXL8Q96CD0 374 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 OMA1Q96E52 524 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 DEPDC7Q96QD5 511 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ARMC7Q9H6L4 198 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 NRCAMQ92823 1304 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PDZK1P1A8MUH7 402 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 RAD51BO15315 384 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SNAI1O95863 264 aaPredicted RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 GOT1P17174 413 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ATP5F1P24539 256 aaPredicted RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CDH13P55290 713 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SQLEQ14534 574 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PLEKHG4Q58EX7 1191 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 TTC23Q5W5X9 447 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 OR52E8Q6IFG1 317 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 SPESP1Q6UW49 350 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PSTKQ8IV42 348 aaKnown RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 FNDC5Q8NAU1 212 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 GPR20Q99678 358 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 TBCDQ9BTW9 1192 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 RBM22Q9NW64 420 aaKnown RBP eCLIP11.63□□□□□ -0.557e-6■■■□□ 17.4
DNMT3B-201ENST00000201963 ANKRD6Q9Y2G4 727 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 COQ4Q9Y3A0 265 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 PKP3Q9Y446 797 aa11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 MTF2Q9Y483 593 aaPredicted RBP11.63□□□□□ -0.55
DNMT3B-201ENST00000201963 CCDC154A6NI56 674 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 NPY2RP49146 381 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 CCT8P50990 548 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 MRNIPQ6NTE8 343 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 SPPL2CQ8IUH8 684 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 SIX5Q8N196 739 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 HTRA1Q92743 480 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 LENG9Q96B70 501 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 APOL5Q9BWW9 433 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 RIBC2Q9H4K1 309 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 TUBA8Q9NY65 449 aaPredicted RBP11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 ADAM28Q9UKQ2 775 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 LOC100506127A0A0U1RQW1 187 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 LACTBL1A8MY62 500 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 BOLA2-SMG1P6H3BVE0 249 aa11.62□□□□□ -0.55
DNMT3B-201ENST00000201963 TK2O00142 265 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms