RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TPRG1LQ5T0D9 272 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 ACAD10Q6JQN1 1059 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 PPP1R2P3Q6NXS1 205 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 IGF2-ASQ6U949 168 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 TMC6Q7Z403 805 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 IRF2BP2Q7Z5L9 587 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 TTC7BQ86TV6 843 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 EPAS1Q99814 870 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 KLC2Q9H0B6 622 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 LRRC19Q9H756 370 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 CATSPERBQ9H7T0 1116 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 MYO6Q9UM54 1294 aa16.08■□□□□ 0.16
ERCC1-201ENST00000013807 CFAP46Q8IYW2 2715 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 TSPAN11A1L157 253 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 ANKRD62A6NC57 917 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 EIF3CLB5ME19 914 aaKnown RBP16.07■□□□□ 0.16
ERCC1-201ENST00000013807 RASA4BC9J798 803 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 NEMP1O14524 444 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
ERCC1-201ENST00000013807 AQP9O43315 295 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 RASA4O43374 803 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 NEBLO76041 1014 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 TM7SF2O76062 418 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 IGSF6O95976 241 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 TIMP2P16035 220 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 JUNDP17535 347 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 ITPKBP27987 946 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 GRM3Q14832 879 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 STX1AQ16623 288 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 TMEM52BQ4KMG9 183 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 ZNF542PQ5EBM4 170 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 ATXN7L2Q5T6C5 722 aaPredicted RBP16.07■□□□□ 0.16
ERCC1-201ENST00000013807 DNAJC24Q6P3W2 148 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 SASS6Q6UVJ0 657 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 LRRC69Q6ZNQ3 347 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 MCOLN2Q8IZK6 566 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 LSMEM2Q8N112 164 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 RYBPQ8N488 228 aaPredicted RBP16.07■□□□□ 0.16
ERCC1-201ENST00000013807 LSM14AQ8ND56 463 aaKnown RBP16.07■□□□□ 0.16
ERCC1-201ENST00000013807 DEPDC7Q96QD5 511 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 EIF3CQ99613 913 aaKnown RBP16.07■□□□□ 0.16
ERCC1-201ENST00000013807 BOCQ9BWV1 1114 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 C1QTNF7Q9BXJ2 289 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 PDFQ9HBH1 243 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 ITM2BQ9Y287 266 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 ATMQ13315 3056 aa16.07■□□□□ 0.16
ERCC1-201ENST00000013807 TK2O00142 265 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 FERP16591 822 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 IGFALSP35858 605 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 LSSP48449 732 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 PEX5P50542 639 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 NDST2P52849 883 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 CYTH1Q15438 398 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 KDM7AQ6ZMT4 941 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-201ENST00000013807 TPCN2Q8NHX9 752 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 HMCESQ96FZ2 354 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 CRELD1Q96HD1 420 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 HIC2Q96JB3 615 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 ZNF578Q96N58 590 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-201ENST00000013807 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 MCEEQ96PE7 176 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 UBL7Q96S82 380 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-201ENST00000013807 SPASTQ9UBP0 616 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 LHX3Q9UBR4 397 aa16.06■□□□□ 0.16
ERCC1-201ENST00000013807 IPO11Q9UI26 975 aaKnown RBP16.06■□□□□ 0.16
ERCC1-201ENST00000013807 PNMA8BQ9ULN7 279 aaPredicted RBP16.06■□□□□ 0.16
ERCC1-201ENST00000013807 LMO7DNF2Z398 122 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 MMP20O60882 483 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 CDK11BP21127 795 aaKnown RBP16.05■□□□□ 0.16
ERCC1-201ENST00000013807 CSNK1DP48730 415 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 ERVPABLB-1P60509 514 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 RHOAP61586 193 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 OGDHQ02218 1023 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 ELP6Q0PNE2 266 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 UGP2Q16851 508 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 PLEKHA7Q6IQ23 1121 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 SCYL2Q6P3W7 929 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 MACC1Q6ZN28 852 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 DNAAF5Q86Y56 855 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 SDR16C5Q8N3Y7 309 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 IFI44Q8TCB0 444 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 PCMTD1Q96MG8 357 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-201ENST00000013807 ZNF641Q96N77 438 aaPredicted RBP16.05■□□□□ 0.16
ERCC1-201ENST00000013807 SSUH2Q9Y2M2 353 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 PCDHB1Q9Y5F3 818 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 COL6A6A6NMZ7 2263 aa16.05■□□□□ 0.16
ERCC1-201ENST00000013807 CFAP69A5D8W1 941 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 TMEM110-MUSTN1A8MSY1 372 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 CREB3O43889 395 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 PRAMEF11O60813 436 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 GCATO75600 419 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 EIF4A3P38919 411 aaKnown RBP16.04■□□□□ 0.16
ERCC1-201ENST00000013807 THOP1P52888 689 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 TLE3Q04726 772 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 ISXQ2M1V0 245 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 AFMIDQ63HM1 303 aa16.04■□□□□ 0.16
ERCC1-201ENST00000013807 DCUN1D2Q6PH85 259 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms