RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 NR5A2O00482 541 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PRODHO43272 600 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TRIM3O75382 744 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ULK1O75385 1050 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 HLA-DRAP01903 254 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 AKR1B1P15121 316 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TIE1P35590 1138 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 FAM46CQ5VWP2 391 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 MPZL3Q6UWV2 235 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 C3P1Q6ZMU1 363 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GRAMD1CQ8IYS0 662 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 NANSQ9NR45 359 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TRAF6Q9Y4K3 522 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 NRXN1Q9ULB1 1477 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PGK1P00558 417 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 IFNA6P05013 189 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PPM1AP35813 382 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 KLHL22Q53GT1 634 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 FBXO47Q5MNV8 452 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 MFSD5Q6N075 450 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF276Q8N554 614 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SOCS4Q8WXH5 440 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 VRK1Q99986 396 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 RGPD8O14715 1765 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SLC22A1O15245 554 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 NPPAP01160 153 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CALCAP01258 141 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 FGF1P05230 155 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GSTT1P30711 240 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 S100A7P31151 101 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GPR1P46091 355 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CDK9P50750 372 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 USP41Q3LFD5 358 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ZFP69Q49AA0 526 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 EIPR1Q53HC9 387 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 DUS1LQ6P1R4 473 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 OLFML1Q6UWY5 402 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ADGRF2Q8IZF7 708 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 EMC1Q8N766 993 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 METTL6Q8TCB7 284 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 NELL1Q92832 810 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TUBA1CQ9BQE3 449 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 RETREG1Q9H6L5 497 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ATP13A3Q9H7F0 1226 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ABCC13Q9NSE7 274 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PLEKHA8P1O95397 391 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ACSM2AQ08AH3 577 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 EPC2Q52LR7 807 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF697Q5TEC3 545 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ACSM2BQ68CK6 577 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 C4orf19Q8IY42 314 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ADCY4Q8NFM4 1077 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 POF1BQ8WVV4 589 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 C18orf25Q96B23 403 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 HERC2P3Q9BVR0 1158 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM138Q9NPI0 162 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TLL2Q9Y6L7 1015 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 A0A1B0GVC2 190 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 C2CD2LO14523 706 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 KLHL18O94889 574 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SLC18A1P54219 525 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ADAM8P78325 824 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GOLGA7BQ2TAP0 167 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TBC1D25Q3MII6 688 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 AGKQ53H12 422 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CERS6Q6ZMG9 384 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 MGME1Q9BQP7 344 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 MLXIPLQ9NP71 852 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GTF2IRD1Q9UHL9 959 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHGC3Q9UN70 934 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 KCNIP3Q9Y2W7 256 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ANXA5P08758 320 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 MZF1P28698 734 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ZSWIM7Q19AV6 140 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 WDR59Q6PJI9 974 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CBWD2Q8IUF1 395 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ANKMY2Q8IV38 441 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 IGDCC4Q8TDY8 1250 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ATXN7L3BQ96GX2 97 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CAMK1GQ96NX5 476 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 KLHL1Q9NR64 748 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PLK2Q9NYY3 685 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHGA10Q9Y5H3 936 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 UGT2B17O75795 530 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CKBP12277 381 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 OTUD4Q01804 1114 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 GNA12Q03113 381 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 UNQ6126/PRO20091Q6UXV3 157 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 SLC22A17Q8WUG5 538 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 KAT5Q92993 513 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 HINFPQ9BQA5 517 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 DDX43Q9NXZ2 648 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 IKZF3Q9UKT9 509 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 ITGA2BP08514 1039 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 FIP1L1Q6UN15 594 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 NSUN4Q96CB9 384 aaKnown RBP6.12□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM176AQ96HP8 235 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 NUDT12Q9BQG2 462 aa6.12□□□□□ -1.43
VPS13D-201ENST00000011700 CENPOQ9BU64 300 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms