RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 DNAJC18Q9H819 358 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 GMIPQ9P107 970 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 OPTCQ9UBM4 332 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 PADI4Q9UM07 663 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 SNX6Q9UNH7 406 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
CFTR-201ENST00000003084 ALS2Q96Q42 1657 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 hCG_1818297A0A087WSY0 165 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 ANKRD33BA6NCL7 494 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 H3BS24 57 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 AIM2O14862 343 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ST8SIA5O15466 376 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PPM1BO75688 479 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 FCGR1AP12314 374 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TPH1P17752 444 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 LPOP22079 712 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 JAK1P23458 1154 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NTSP30990 170 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 GUCA1AP43080 201 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.28□□□□□ -1.72
CFTR-201ENST00000003084 DUSP4Q13115 394 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CCINQ13939 588 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 BOP1Q14137 746 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 FLOT2Q14254 428 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ARHGAP17Q68EM7 881 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ZNF544Q6NX49 715 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SPATA20Q8TB22 786 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 STAG3L4Q8TBR4 150 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 EPS8L3Q8TE67 593 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 KAT2BQ92831 832 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ITPKCQ96DU7 683 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SGF29Q96ES7 293 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ACOX2Q99424 681 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 KLF6Q99612 283 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 ASB8Q9H765 288 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 AASDHPPTQ9NRN7 309 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 DZANK1Q9NVP4 752 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SCN3BQ9NY72 215 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PCYOX1Q9UHG3 505 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TMCC3Q9ULS5 477 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.28□□□□□ -1.72
CFTR-201ENST00000003084 NAALADL1Q9UQQ1 740 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 EFR3BQ9Y2G0 817 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SNX13Q9Y5W8 968 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SYNDIG1LA6NDD5 238 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 LRRC72A6NJI9 287 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SMIM22K7EJ46 135 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CLDN5O00501 218 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ACSL4O60488 711 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CPSF4O95639 269 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 CCND3P30281 292 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 CORO1AP31146 461 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 HNRNPH3P31942 346 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 PTPN9P43378 593 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SERPINB10P48595 397 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SLC1A6P48664 564 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CLCNKBP51801 687 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 SLC5A3P53794 718 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 YBEYP58557 167 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 ATP6V0D1P61421 351 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ERVK-21P61565 698 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 FOXD4Q12950 439 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 TAF10Q12962 218 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NFYCQ13952 458 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 LRRC32Q14392 662 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 C15orf59Q2T9L4 293 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 USP51Q70EK9 711 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TRPM8Q7Z2W7 1104 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TRAPPC5Q8IUR0 188 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ZFP28Q8NHY6 868 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 DTX3LQ8TDB6 740 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 FNIP1Q8TF40 1166 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 NKD1Q969G9 470 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ERLEC1Q96DZ1 483 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 DPY30Q9C005 99 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ARHGAP39Q9C0H5 1083 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 LRRC19Q9H756 370 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TRMT13Q9NUP7 481 aaKnown RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 NINJ2Q9NZG7 142 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CNTN3Q9P232 1028 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 TAGLN3Q9UI15 199 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CORO2BQ9UQ03 480 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ENTPD4Q9Y227 616 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ARIH1Q9Y4X5 557 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 A0A1W2PQ45 241 aaPredicted RBP4.28□□□□□ -1.72
CFTR-201ENST00000003084 A0A1W2PQY0 241 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PIPSLA2A3N6 862 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 ANKDD1BA6NHY2 528 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 H3BM21 787 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 H3BQF6 201 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 UBDO15205 165 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 HS6ST1O60243 411 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 GUCA1CO95843 209 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 IL1BP01584 269 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 MYBL2P10244 700 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CCNCP24863 283 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 PSMB4P28070 264 aa4.28□□□□□ -1.72
CFTR-201ENST00000003084 CDK18Q07002 472 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms