RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 NcaphQ8C156 731 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Hdac7Q8C2B3 938 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 ClmnQ8C5W0 1052 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 FggQ8VCM7 436 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Clstn3Q99JH7 956 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Sytl2Q99N50 950 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Trim33Q99PP7 1142 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Commd8Q9CZG3 183 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fam90a1bQ9D4F3 419 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Oma1Q9D8H7 521 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Syde1Q9DBZ9 737 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 GmprQ9DCZ1 345 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Olfr711Q9EPG2 314 aa11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Upf1Q9EPU0 1124 aaKnown RBP11.48□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Rhox3fA2ANE1 215 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Nxpe3B9EKK6 559 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Smok3aC0HKC8 504 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Smok3bC0HKC9 504 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ism2D3Z6A3 493 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Kifc5bE9PUA5 672 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ap1arE9PYF7 298 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 4930426L09RikE9Q0N7 123 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Zfp277E9Q6D6 583 aaKnown RBP11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm8879F6R3J9 157 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm8922F6XVS9 199 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm6460F6YJZ8 199 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm8871F7AXK2 190 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm5160F8VPN3 147 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm21972J3QN38 98 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 PrkacaP05132 351 aaKnown RBP11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Hnf1bP27889 558 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Serpina3cP29621 417 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 PctpP53808 214 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 CartptP56388 129 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 PrkacbP68181 351 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Serpina5P70458 405 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 SgcgP82348 291 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fam171bQ14CH0 825 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 CblbQ3TTA7 982 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Grm5Q3UVX5 1203 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 DazlQ64368 298 aaKnown RBP11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Kiaa1841Q68FF0 718 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 MregQ6NVG5 214 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Casc4Q6P2L7 435 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Stmnd1Q6P3A1 279 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Usp8Q80U87 1080 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Tubgcp5Q8BKN5 1024 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Amer2Q8CCJ4 672 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dmtf1Q8CE22 761 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 HpdlQ8K248 371 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Vmn1r188Q8K3N2 308 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Slc25a3Q8VEM8 357 aaKnown RBP11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Q9CPS8 106 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Alpk2Q91ZB0 2144 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Xlr4aA2BI40 215 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 C7D3YXF5 845 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 BC024978J3QPC3 361 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dnase1l3O55070 310 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Hsd17b7O88736 334 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Mup5P11591 180 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Bmi1P25916 324 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Rnf19aP50636 840 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 YwhahP68510 246 aaKnown RBP11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Tmem65Q4VAE3 234 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 CcnjlQ5SRT8 387 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Mxd4Q60948 209 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Mef2dQ63943 514 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Parp6Q6P6P7 630 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fnip2Q80TD3 1108 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Dnajb13Q80Y75 316 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Csnk1g1Q8BTH8 459 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Pde10aQ8CA95 790 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Arfip2Q8K221 341 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Paip1Q8VE62 400 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Fam192aQ91WE2 254 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ndufa10Q99LC3 355 aaKnown RBP11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Noxred1Q9D3S5 366 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Rin2Q9D684 903 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ift22Q9DAI2 185 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Mettl15Q9DCL4 406 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Cib2Q9Z309 187 aa11.47□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm12248A0A1W2P8B8 313 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Zfr2E9Q5M4 874 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gm42421F6X8D5 166 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 GzmdP11033 252 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Serpina6Q06770 397 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 SkiQ60698 725 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Arhgap30Q640N3 1101 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Colgalt2Q6NVG7 625 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Cfap97Q6ZPR1 541 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Nemp1Q6ZQE4 437 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ccnt2Q7TQK0 723 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Tmco6Q8BQX5 494 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Sept11Q8C1B7 431 aaKnown RBP11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 CtbsQ8R242 366 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Gstm4Q8R5I6 218 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Evi2bQ8VD58 444 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Lars2Q8VDC0 902 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Epsti1Q8VDI1 314 aa11.46□□□□□ -0.57
Ddx55-201ENSMUST00000071057 Ndufaf7Q9CWG8 436 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms