RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cpa1Q7TPZ8 419 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vps50Q8CI71 964 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pacs1Q8K212 961 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 RhoqQ8R527 205 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 4930524N10RikQ9D519 233 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ighv11-1A0A075B5R6 117 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 9230113P08RikD3YWX3 137 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 1810049J17RikQ3V2G9 153 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nlrp4fQ66X05 959 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sp140Q6NSQ5 534 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mab21L3Q8CI17 429 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mgat5Q8R4G6 740 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Jph2Q9ET78 696 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zyg11aA2BFL2 627 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Apol8A2VDH7 339 aaKnown RBP11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Hs3st1O35310 311 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tead2P48301 445 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 HecaQ3V1N5 544 aaKnown RBP11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 PkdccQ5RJI4 492 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Arhgap30Q640N3 1101 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pgs1Q8BHF7 553 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rsl1d1Q8BVY0 452 aaKnown RBP11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 LnpepQ8C129 1025 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cdc16Q8R349 620 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nae1Q8VBW6 534 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Akr1c21Q91WR5 323 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Lpin1Q91ZP3 924 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ccdc81Q9D5W4 654 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Htra2Q9JIY5 458 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slfn8B1ARD8 910 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm7073E9QAS1 335 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 AfpP02772 605 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Dnajc8Q6NZB0 253 aaKnown RBP11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Plekha8Q80W71 519 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rdh13Q8CEE7 334 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 DolkQ8R2Y3 534 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mtmr14Q8VEL2 648 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Lpin3Q99PI4 848 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rnft1Q9DCN7 395 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm44511A0A0N4SW10 223 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Xlr5bA2BI50 236 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vmn2r118E9Q1C1 853 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Klrb1bP27812 223 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pms2P54279 859 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Snx31Q6P8Y7 439 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Usp8Q80U87 1080 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mapk15Q80Y86 549 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gdap2Q9DBL2 498 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mrgpra2aA0A0R4J1Z0 331 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 H2-T24F8VQG4 363 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Hdac7Q8C2B3 938 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc44a3Q921V7 656 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nkd1Q99MH6 471 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Hddc3Q9D114 179 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tchhl1Q9D3P1 638 aa11.97□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm28168A0A087WNP1 180 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm45233A0A0N4SVE0 221 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Trim12cD3Z3L3 497 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Kcnt2D3Z649 1135 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gjd2O54851 321 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Psmb9P28076 219 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 EdnrbP48302 442 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ephb2P54763 986 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 VasnQ9CZT5 673 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sun1Q9D666 913 aaKnown RBP11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Atp6ap1Q9R1Q9 463 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Arhgef37A1IGU4 676 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Got2P05202 430 aaKnown RBP11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gna12P27600 379 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Faf2Q3TDN2 445 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ulk3Q3U3Q1 472 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Atp4aQ64436 1033 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ints6Q6PCM2 883 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rhbdf1Q6PIX5 856 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr1062Q7TR71 315 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tmem161aQ8VCA6 480 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Sec14l2Q99J08 403 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cyp2g1Q9WV19 494 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Col11a2Q64739 1736 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Skint11A7XV14 364 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fam71aB7XG49 585 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Akr1b7P21300 316 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Aff3P51827 1254 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ndst2P52850 883 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gabrb2P63137 512 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Eps8Q08509 821 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tnks2Q3UES3 1166 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc22a16Q497L8 649 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Als2clQ60I26 952 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Znf280cQ6P3Y5 742 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fam53cQ8BXQ8 393 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 ZwilchQ8R060 589 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 B3galt6Q91Z92 325 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cyp4f14Q9EP75 524 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Chrna6Q9R0W9 494 aa11.96□□□□□ -0.49
Pcif1-201ENSMUST00000041643 PappaQ8R4K8 1624 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Adamts6D3Z1A5 1117 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Grk4O70291 574 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mapkapk2P49138 386 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cd36Q08857 472 aa11.96□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms