RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ACVRL1P37023 503 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 COILP38432 576 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 GARSP41250 739 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 FNTAP49354 379 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 NUMBP49757 651 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 PAPOLAP51003 745 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 GNA12Q03113 381 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 GAD2Q05329 585 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 CYP4F3Q08477 520 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 XRCC4Q13426 336 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 POLD3Q15054 466 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 PRKD1Q15139 912 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 OASLQ15646 514 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 PLEKHG6Q3KR16 790 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 SLC45A4Q5BKX6 768 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 FSCBQ5H9T9 825 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 SYCP2LQ5T4T6 812 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 RNF219Q5W0B1 726 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 DARS2Q6PI48 645 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF783Q6ZMS7 281 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 LRRC69Q6ZNQ3 347 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 ARHGAP36Q6ZRI8 547 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 GLRX5Q86SX6 157 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 ZC3H18Q86VM9 953 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 NAT16Q8N8M0 369 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF557Q8N988 423 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 CCNYQ8ND76 341 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 LRRN4CLQ8ND94 238 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 OR52K2Q8NGK3 314 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 FIBINQ8TAL6 211 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 SETD7Q8WTS6 366 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 LRRN4Q8WUT4 740 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 TFB1MQ8WVM0 346 aaKnown RBP9.57□□□□□ -0.88
PHGDH-228ENST00000641847 HMGB4Q8WW32 186 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 HDAC11Q96DB2 347 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 RUNDC3BQ96NL0 473 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 CAMK1GQ96NX5 476 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 KRT12Q99456 494 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 LGMNQ99538 433 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 MAGEH1Q9H213 219 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 SP110Q9HB58 689 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 FSCN3Q9NQT6 498 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 CHD5Q8TDI0 1954 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 ATG2BQ96BY7 2078 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 ATMQ13315 3056 aa9.57□□□□□ -0.88
PHGDH-228ENST00000641847 PIEZO2Q9H5I5 2752 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 EML5Q05BV3 1969 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 A0A0D9SEW6 157 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 HACD1B0YJ81 288 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 K7EQS6 105 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 CACNG3O60359 315 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ITGAVP06756 1048 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 MZF1P28698 734 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 HLA-FP30511 346 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 CD70P32970 193 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ETFBP38117 255 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 KCNJ1P48048 391 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 OXCT1P55809 520 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 YBEYP58557 167 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF33AQ06730 810 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 PPIDQ08752 370 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 AP1B1Q10567 949 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 GAB4Q2WGN9 574 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 NAIF1Q69YI7 327 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 DRICH1Q6PGQ1 229 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 CCDC137Q6PK04 289 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 C12orf40Q86WS4 652 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 CCDC13Q8IYE1 715 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 RGL4Q8IZJ4 473 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 PDCD7Q8N8D1 485 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 TXNDC5Q8NBS9 432 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 NOA1Q8NC60 698 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 EZH1Q92800 747 aaPredicted RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ARHGEF2Q92974 986 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 XPO6Q96QU8 1125 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 CDC6Q99741 560 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 SPON2Q9BUD6 331 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 SLC2A11Q9BYW1 496 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 BRD8Q9H0E9 1235 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 C10orf88Q9H8K7 445 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ATP13A1Q9HD20 1204 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ABCB8Q9NUT2 735 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 DNAJC17Q9NVM6 304 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 IPO11Q9UI26 975 aaKnown RBP9.56□□□□□ -0.88
PHGDH-228ENST00000641847 GGA2Q9UJY4 613 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 VPS28Q9UK41 221 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF148Q9UQR1 794 aa9.56□□□□□ -0.88
PHGDH-228ENST00000641847 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TCRBV21S2A2A0A5A6 115 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 CFAP69A5D8W1 941 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 TRABD2BA6NFA1 517 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 SGK1O00141 431 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 KCNN4O15554 427 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 RRP8O43159 456 aaKnown RBP9.55□□□□□ -0.88
PHGDH-228ENST00000641847 MAFKO60675 156 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF217O75362 1048 aa9.55□□□□□ -0.88
PHGDH-228ENST00000641847 ZNF189O75820 626 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms