RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SLC11A2P49281 568 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 CCR5P51681 352 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 TAS2R40P59535 323 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 SLC25A11Q02978 314 aaKnown RBP7.57□□□□□ -1.2
PHGDH-225ENST00000641720 CA9Q16790 459 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 SMTNL2Q2TAL5 461 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 INAVAQ3KP66 663 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 ADGRF1Q5T601 910 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 FAM72AQ5TYM5 149 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 MANEALQ5VSG8 457 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 KIAA1614Q5VZ46 1190 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 FAM72DQ6L9T8 149 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 FBXL22Q6P050 247 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 SND1Q7KZF4 910 aaKnown RBP eCLIP7.57□□□□□ -1.21e-9■■■□□ 18.8
PHGDH-225ENST00000641720 KIAA1328Q86T90 577 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 FAM72BQ86X60 149 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 UNC45BQ8IWX7 931 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 LGI2Q8N0V4 545 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 CFAP52Q8N1V2 620 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 PYROXD2Q8N2H3 581 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 ATP6V0D2Q8N8Y2 350 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 HJURPQ8NCD3 748 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-225ENST00000641720 UCMAQ8WVF2 138 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 AZIN2Q96A70 460 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 NTAN1Q96AB6 310 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 FAM129BQ96TA1 746 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 LGMNQ99538 433 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 SNRNP25Q9BV90 132 aaKnown RBP7.57□□□□□ -1.2
PHGDH-225ENST00000641720 ACE2Q9BYF1 805 aaPredicted RBP7.57□□□□□ -1.2
PHGDH-225ENST00000641720 SIK2Q9H0K1 926 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 WDCPQ9H6R7 721 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 KLHL11Q9NVR0 708 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.57□□□□□ -1.2
PHGDH-225ENST00000641720 PCSK1NQ9UHG2 260 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 IP6K2Q9UHH9 426 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 VANGL2Q9ULK5 521 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 ZNF510Q9Y2H8 683 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 HYOU1Q9Y4L1 999 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 CELSR1Q9NYQ6 3014 aa7.57□□□□□ -1.2
PHGDH-225ENST00000641720 C2CD3Q4AC94 2353 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 ZFHX3Q15911 3703 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 A0A0A6YYK5 440 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 A0A1B0GVM2 712 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MACROD2A1Z1Q3 448 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 BTNL10A8MVZ5 291 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MYO1FO00160 1098 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MID1O15344 667 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 TIMM44O43615 452 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 SIGLEC6O43699 453 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 SLC28A2O43868 658 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 SIN3BO75182 1162 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MT-CO3P00414 261 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MPOP05164 745 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MAN1A1P33908 653 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 ADRA1BP35368 520 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 PCK1P35558 622 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 GJC1P36383 396 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 LSSP48449 732 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MARCKSL1P49006 195 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 PDX1P52945 283 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 METAP1P53582 386 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 ADPRHP54922 357 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 HADHBP55084 474 aaKnown RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 UCNP55089 124 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 ERVPABLB-1P60509 514 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 AUHQ13825 339 aaKnown RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 PIGHQ14442 188 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MESDQ14696 234 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 HNRNPA1L2Q32P51 320 aaKnown RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 TAF1BQ53T94 588 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 C9orf64Q5T6V5 341 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MBLAC2Q68D91 279 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 ZNF776Q68DI1 518 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 C11orf63Q6NUN7 778 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 SCYL2Q6P3W7 929 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 CHST9Q7L1S5 443 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 SLFN11Q7Z7L1 901 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 RHOT2Q8IXI1 618 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 LRRC57Q8N9N7 239 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 TPCN2Q8NHX9 752 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 WFIKKN2Q8TEU8 576 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 TTC17Q96AE7 1141 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 NAF1Q96HR8 494 aaKnown RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 HAPLN3Q96S86 360 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 KCTD15Q96SI1 283 aaPredicted RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 TRIM4Q9C037 500 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 CIPCQ9C0C6 399 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 NEUROG2Q9H2A3 272 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 LUC7LQ9NQ29 371 aaKnown RBP7.56□□□□□ -1.2
PHGDH-225ENST00000641720 GPR27Q9NS67 375 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 STARD5Q9NSY2 213 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 ABCB8Q9NUT2 735 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 MPP6Q9NZW5 540 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 IL17BQ9UHF5 180 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 FZD4Q9ULV1 537 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 FZD10Q9ULW2 581 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 PYCARDQ9ULZ3 195 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 AP4E1Q9UPM8 1137 aa7.56□□□□□ -1.2
PHGDH-225ENST00000641720 PPP2R2CQ9Y2T4 447 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms