RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 REP15Q6BDI9 236 aa13.9□□□□□ -0.18
SCARB2-227ENST00000640957 DENND6AQ8IWF6 608 aa13.9□□□□□ -0.18
SCARB2-227ENST00000640957 FSTL5Q8N475 847 aaPredicted RBP13.9□□□□□ -0.18
SCARB2-227ENST00000640957 IL12RB2Q99665 862 aa13.9□□□□□ -0.18
SCARB2-227ENST00000640957 XYLT2Q9H1B5 865 aa13.9□□□□□ -0.18
SCARB2-227ENST00000640957 ATXN3LQ9H3M9 355 aa13.9□□□□□ -0.18
SCARB2-227ENST00000640957 EHD1Q9H4M9 534 aa13.9□□□□□ -0.18
SCARB2-227ENST00000640957 NR5A2O00482 541 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 NRP2O60462 931 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 LYPLA2O95372 231 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 POLBP06746 335 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 KCNA2P16389 499 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 IL7RP16871 459 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 JAK1P23458 1154 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 BCAT1P54687 386 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CNSTQ6PJW8 725 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CCDC80Q76M96 950 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 FAM149B1Q96BN6 582 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 DSEQ9UL01 958 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 NOX1Q9Y5S8 564 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 TRIP11Q15643 1979 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 DLGAP1O14490 977 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 MFSD11O43934 449 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CNOT3O75175 753 aaKnown RBP13.89□□□□□ -0.19
SCARB2-227ENST00000640957 TNNC2P02585 160 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 ALDH2P05091 517 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 PABPC1P11940 636 aaKnown RBP13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CCNA2P20248 432 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 GARSP41250 739 aaKnown RBP13.89□□□□□ -0.19
SCARB2-227ENST00000640957 NDST1P52848 882 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CDH13P55290 713 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 C1QTNF8P60827 252 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 PDK2Q15119 407 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 KIF19Q2TAC6 998 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 ANKRD34AQ69YU3 496 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 SLFN12LQ6IEE8 588 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 LSMEM2Q8N112 164 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 HMGCLL1Q8TB92 370 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 ZC3H15Q8WU90 426 aaKnown RBP13.89□□□□□ -0.19
SCARB2-227ENST00000640957 COPS5Q92905 334 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 ASB9Q96DX5 294 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 P2RY11Q96G91 374 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 MKS1Q9NXB0 559 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CACNA2D2Q9NY47 1150 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 KLHL8Q9P2G9 620 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-227ENST00000640957 RAP2CQ9Y3L5 183 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.89□□□□□ -0.19
SCARB2-227ENST00000640957 DLX3O60479 287 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 MYO1DO94832 1006 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 BDNFP23560 247 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 SLC13A2Q13183 592 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 TIFABQ6ZNK6 161 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 ZBTB8OSQ8IWT0 167 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 AGBL3Q8NEM8 1001 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 DNAJB14Q8TBM8 379 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 GPRASP2Q96D09 838 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 VPS39Q96JC1 886 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 GLT1D1Q96MS3 346 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 CSF3RQ99062 836 aa13.89□□□□□ -0.19
SCARB2-227ENST00000640957 COL24A1Q17RW2 1714 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 AQP9O43315 295 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 IL18RAPO95256 599 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 PTPRAP18433 802 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 MPP1Q00013 466 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 POLD3Q15054 466 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 PPP1R14BQ96C90 147 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 CDHR1Q96JP9 859 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ZNF518BQ9C0D4 1074 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SNX25Q9H3E2 840 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 OXSMQ9NWU1 459 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 PNMA8BQ9ULN7 279 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 CITO14578 2027 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SYNCRIPO60506 623 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 RSL1D1O76021 490 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 PRKCBP05771 671 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SBK3P0C264 359 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ADORA2BP29275 332 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SPRP35270 261 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SEPHS1P49903 392 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 GOLGA7BQ2TAP0 167 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 CDKL3Q8IVW4 592 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 TMEM176AQ96HP8 235 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ITCHQ96J02 903 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 TPK1Q9H3S4 243 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ELP3Q9H9T3 547 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ZNF229Q9UJW7 825 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 KCNA5P22460 613 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 FSHRP23945 695 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 NMBRP28336 390 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms