RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
HLA-C-210ENST00000640219 USP9YO00507 2555 aaPredicted RBP14.04□□□□□ -0.16
HLA-C-210ENST00000640219 CCDC187A0A096LP49 1063 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 SLC7A4O43246 635 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 NOBOXO60393 691 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 RNGTTO60942 597 aaKnown RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 NEBLO76041 1014 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 FBXO21O94952 628 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ZRANB2O95218 330 aaKnown RBP eCLIP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 METAP1P53582 386 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 TBX4P57082 545 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 JAM2P57087 298 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 CDK17Q00537 523 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 SRSF6Q13247 344 aaKnown RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ZNF177Q13360 481 aaPredicted RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ELAVL3Q14576 367 aaKnown RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 TGIF1Q15583 401 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 PITRM1Q5JRX3 1037 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 RNF219Q5W0B1 726 aaPredicted RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 GUSBP11Q6P575 273 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 TMEM110Q86TL2 294 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 DEFB106AQ8N104 65 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 TMEM145Q8NBT3 493 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 EPS8L1Q8TE68 723 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 CPA5Q8WXQ8 436 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 PTPRN2Q92932 1015 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 FAM131CQ96AQ9 280 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 PRICKLE1Q96MT3 831 aaPredicted RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 PARD6BQ9BYG5 372 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 STK33Q9BYT3 514 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 IRX2Q9BZI1 471 aaPredicted RBP14.03□□□□□ -0.16
HLA-C-210ENST00000640219 EDEM3Q9BZQ6 932 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 ZNF446Q9NWS9 450 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 MYO6Q9UM54 1294 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
HLA-C-210ENST00000640219 COL27A1Q8IZC6 1860 aaPredicted RBP14.02□□□□□ -0.16
HLA-C-210ENST00000640219 CCDC151A5D8V7 595 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 EIF3CLB5ME19 914 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 SLC31A1O15431 190 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 IRAK2O43187 625 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 TCEA3O75764 348 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 IGLV3-27P01718 113 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 CHRNB2P17787 502 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 SLC5A2P31639 672 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 ACADSBP45954 432 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 RNASE9P60153 205 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 FOXK1P85037 733 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 ECT2LQ008S8 904 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 IGFBP7Q16270 282 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 MEA1Q16626 185 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 FAM133BQ5BKY9 247 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 ZC3H12AQ5D1E8 599 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 ZNF542PQ5EBM4 170 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 CCDC122Q5T0U0 273 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 OTUD1Q5VV17 481 aaPredicted RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 NAA35Q5VZE5 725 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 ZCCHC8Q6NZY4 707 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 CRTC1Q6UUV9 634 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 OLFML1Q6UWY5 402 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 MMS22LQ6ZRQ5 1243 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 C14orf80Q86SX3 495 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 PTRH1Q86Y79 214 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 CARNMT1Q8N4J0 409 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 FAM26EQ8N5C1 309 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 OR13H1Q8NG92 308 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 RPL10LQ96L21 214 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 FAM81BQ96LP2 452 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 EIF3CQ99613 913 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 NUCKS1Q9H1E3 243 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 EPN3Q9H201 632 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 GEMIN8Q9NWZ8 242 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 NCKIPSDQ9NZQ3 722 aa14.02□□□□□ -0.17
HLA-C-210ENST00000640219 NOCTQ9UK39 431 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 UTP20O75691 2785 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 TDRD6O60522 2096 aaKnown RBP14.02□□□□□ -0.17
HLA-C-210ENST00000640219 RELNP78509 3460 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 BSNQ9UPA5 3926 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 BLACEA4D250 179 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 GOLGA8SH3BPF8 625 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 MOCS3O95396 460 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 TRUB2O95900 331 aaKnown RBP14.01□□□□□ -0.17
HLA-C-210ENST00000640219 VAV1P15498 845 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 PRLRP16471 622 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 SLC11A2P49281 568 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 HNRNPKP61978 463 aaKnown RBP eCLIP14.01□□□□□ -0.17
HLA-C-210ENST00000640219 FMO1Q01740 532 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 CDH18Q13634 790 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 SKIDA1Q1XH10 827 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 RAB6CQ53S08 254 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 DCAF6Q58WW2 860 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 FSCBQ5H9T9 825 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 CCDC70Q6NSX1 233 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 TRNP1Q6NT89 227 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 CIR1Q86X95 450 aaPredicted RBP14.01□□□□□ -0.17
HLA-C-210ENST00000640219 DNAAF5Q86Y56 855 aa14.01□□□□□ -0.17
HLA-C-210ENST00000640219 JAMLQ86YT9 394 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms