RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 C3orf70A6NLC5 250 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 PRR5-ARHGAP8B1AHC4 643 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 PATE3B3GLJ2 98 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 MAFKO60675 156 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 NEBLO76041 1014 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 ZRANB2O95218 330 aaKnown RBP eCLIP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 MAP3K6O95382 1288 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 HSPA9P38646 679 aaKnown RBP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 CCR5P51681 352 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 GALNT2Q10471 571 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 CFAP58Q5T655 872 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 TCEAL6Q6IPX3 200 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 MFSD7Q6UXD7 560 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 GDPD4Q6W3E5 623 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 CCDC50Q8IVM0 306 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 RCOR2Q8IZ40 523 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 SYCE1Q8N0S2 351 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 ZCCHC9Q8N567 271 aaKnown RBP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 PAF1Q8N7H5 531 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 TSEN2Q8NCE0 465 aaKnown RBP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 TCEAL3Q969E4 200 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 KLHL32Q96NJ5 620 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 ADGRG1Q9Y653 693 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 SHROOM3Q8TF72 1996 aa16.05■□□□□ 0.16
SPIN3-233ENST00000640039 TPRP12270 2363 aaKnown RBP16.05■□□□□ 0.16
SPIN3-233ENST00000640039 GON4LQ3T8J9 2241 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 C16orf96A6NNT2 1141 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 BCAT2O15382 392 aaPredicted RBP16.04■□□□□ 0.16
SPIN3-233ENST00000640039 KRT86O43790 486 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 PCDH8O95206 1070 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 SERPINF2P08697 491 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 ADRB3P13945 408 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 CD27P26842 260 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 MMP13P45452 471 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 MAPK8P45983 427 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 GBE1Q04446 702 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 SLC10A7Q0GE19 358 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 TFDP2Q14188 446 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 TFDP3Q5H9I0 405 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 MARC1Q5VT66 337 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 SLC9A4Q6AI14 798 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 SLC23A3Q6PIS1 610 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 PARS2Q7L3T8 475 aaKnown RBP16.04■□□□□ 0.16
SPIN3-233ENST00000640039 SRLQ86TD4 932 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 PRPF39Q86UA1 669 aaKnown RBP16.04■□□□□ 0.16
SPIN3-233ENST00000640039 KATNAL2Q8IYT4 538 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 CCNYQ8ND76 341 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 RAB7BQ96AH8 199 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 PSKH2Q96QS6 385 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 TUBGCP5Q96RT8 1024 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 CPEB1Q9BZB8 566 aaKnown RBP16.04■□□□□ 0.16
SPIN3-233ENST00000640039 ATP13A3Q9H7F0 1226 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 SLC6A14Q9UN76 642 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 HEY1Q9Y5J3 304 aa16.04■□□□□ 0.16
SPIN3-233ENST00000640039 CCDC66A2RUB6 948 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 GRID2IPA4D2P6 1211 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 RNF103O00237 685 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 NEMP1O14524 444 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 INSIG1O15503 277 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 IGHV4-34P06331 123 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 XPAP23025 273 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-233ENST00000640039 CCNCP24863 283 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 SERPINA4P29622 427 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 CDKN2BP42772 138 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 CSNK1DP48730 415 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 SCNN1BP51168 640 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-233ENST00000640039 DYNLT1P63172 113 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 IRX4P78413 519 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPIN3-233ENST00000640039 TEAD4Q15561 434 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 KAZNQ674X7 775 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 NEK5Q6P3R8 708 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 SPOCD1Q6ZMY3 1216 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 TRIM69Q86WT6 500 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 HDAC11Q96DB2 347 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 EDEM2Q9BV94 578 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 DTLQ9NZJ0 730 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 AMFRQ9UKV5 643 aa16.03■□□□□ 0.16
SPIN3-233ENST00000640039 CDV3Q9UKY7 258 aaKnown RBP16.03■□□□□ 0.16
SPIN3-233ENST00000640039 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-233ENST00000640039 A0A1W2PPC4 97 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 LNP1A1A4G5 178 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 PPP1R12AO14974 1030 aaPredicted RBP16.02■□□□□ 0.16
SPIN3-233ENST00000640039 RNGTTO60942 597 aaKnown RBP16.02■□□□□ 0.16
SPIN3-233ENST00000640039 PIGNO95427 931 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 SYPP08247 313 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 CCDC175P0C221 793 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 SDHBP21912 280 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 MAT2AP31153 395 aaKnown RBP16.02■□□□□ 0.16
SPIN3-233ENST00000640039 CTNNA1P35221 906 aaKnown RBP16.02■□□□□ 0.16
SPIN3-233ENST00000640039 NUDT1P36639 197 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 CETN2P41208 172 aa16.02■□□□□ 0.16
SPIN3-233ENST00000640039 PI4KAP42356 2102 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms