RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	YPEL5	P62699	121 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	STK4	Q13043	487 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	CUL4B	Q13620	913 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	CERCAM	Q5T4B2	595 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	KRT39	Q6A163	491 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	C22orf39	Q6P5X5	142 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	NYAP1	Q6ZVC0	841 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	INTS8	Q75QN2	995 aa	Known RBP	11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	PARS2	Q7L3T8	475 aa	Known RBP	11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	PIM3	Q86V86	326 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	SFTPA2	Q8IWL1	248 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	GPR156	Q8NFN8	814 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	TMEM174	Q8WUU8	243 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	TFAP2B	Q92481	460 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	ART4	Q93070	314 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	HAPLN3	Q96S86	360 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	PSMB7	Q99436	277 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	SLC12A6	Q9UHW9	1150 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	VPS51	Q9UID3	782 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	HIVEP3	Q5T1R4	2406 aa		11.91	□□□□□ -0.5
PAX6-238	ENST00000638755	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	MKRN2OS	H3BPM6	223 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	RASGRP1	O95267	797 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	TRUB2	O95900	331 aa	Known RBP	11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	GGCX	P38435	758 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	ALG11	Q2TAA5	492 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	LCLAT1	Q6UWP7	414 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	ZSCAN30	Q86W11	494 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	FAM186B	Q8IYM0	893 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	KIAA0895	Q8NCT3	520 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	FBXL13	Q8NEE6	735 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	ASB12	Q8WXK4	309 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	MOCOS	Q96EN8	888 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	FAXDC2	Q96IV6	333 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	USP28	Q96RU2	1077 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	MBNL1	Q9NR56	388 aa	Known RBP	11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	RAB20	Q9NX57	234 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	COX16	Q9P0S2	106 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	VANGL2	Q9ULK5	521 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	PCDHGA3	Q9Y5H0	932 aa		11.9	□□□□□ -0.5
PAX6-238	ENST00000638755	PRRC2C	Q9Y520	2896 aa	Known RBP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	LOC101059948	A0A1B0GTJ6	334 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	WIPF3	A6NGB9	483 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755		B4DGG1	531 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	HGS	O14964	777 aa	Predicted RBP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	CALU	O43852	315 aa	Predicted RBP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	CPNE6	O95741	557 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	PNLIP	P16233	465 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	NR2F2	P24468	414 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	ABL2	P42684	1182 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	PITX1	P78337	314 aa	Predicted RBP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	AUH	Q13825	339 aa	Known RBP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	TCTN3	Q6NUS6	607 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	ENPP7	Q6UWV6	458 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	CCDC13	Q8IYE1	715 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	GRAMD1C	Q8IYS0	662 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	NRSN1	Q8IZ57	195 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	CCDC112	Q8NEF3	446 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	FAM46D	Q8NEK8	389 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	PRR7	Q8TB68	274 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	CCDC74B	Q96LY2	380 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	HEPH	Q9BQS7	1158 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	NUDT22	Q9BRQ3	303 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	ZDHHC6	Q9H6R6	413 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	ST7	Q9NRC1	585 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	SLC39A1	Q9NY26	324 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	DONSON	Q9NYP3	566 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	ADGRG4	Q8IZF6	3080 aa		11.89	□□□□□ -0.51
PAX6-238	ENST00000638755	IGHV5-10-1	A0A0J9YXX1	117 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	C16orf96	A6NNT2	1141 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	MAPK13	O15264	365 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	B4GAT1	O43505	415 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	MMP20	O60882	483 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	CLDN11	O75508	207 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	ZNF821	O75541	412 aa	Predicted RBP	11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	CALCA	P01258	141 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	RHOC	P08134	193 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	TCN2	P20062	427 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	ALDH4A1	P30038	563 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	MXI1	P50539	228 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	CLCN6	P51797	869 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	COPB1	P53618	953 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	OR1D5	P58170	312 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	SRP54	P61011	504 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	B4GALNT1	Q00973	533 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	CUL2	Q13617	745 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	C14orf28	Q4W4Y0	310 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	LRRC73	Q5JTD7	316 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	TAF8	Q7Z7C8	310 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	STARD8	Q92502	1023 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	HSFY1	Q96LI6	401 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	DDA1	Q9BW61	102 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	ASPSCR1	Q9BZE9	553 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	INTS2	Q9H0H0	1204 aa	Known RBP	11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms